Iron in PDB 1ewh: Structure of Cytochrome F From Chlamydomonas Reinhardtii

The structure of Structure of Cytochrome F From Chlamydomonas Reinhardtii, PDB code: 1ewh was solved by G.Sainz, C.J.Carrell, M.V.Ponamarev, G.M.Soriano, W.A.Cramer, J.L.Smith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.35
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	76.450, 94.300, 119.900, 90.00, 90.00, 90.00
R / Rfree (%)	18.7 / 25.6

The binding sites of Iron atom in the Structure of Cytochrome F From Chlamydomonas Reinhardtii (pdb code 1ewh). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 3 binding sites of Iron where determined in the Structure of Cytochrome F From Chlamydomonas Reinhardtii, PDB code: 1ewh:
Jump to Iron binding site number: 1; 2; 3;

Iron binding site 1 out of 3 in the Structure of Cytochrome F From Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Cytochrome F From Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe253 b:22.1 occ:1.00 FE A:HEM253 0.0 22.1 1.0 ND A:HEM253 1.9 20.6 1.0 NC A:HEM253 1.9 17.5 1.0 NB A:HEM253 1.9 14.7 1.0 NA A:HEM253 2.0 19.2 1.0 NE2 A:HIS25 2.0 16.1 1.0 N A:TYR1 2.0 18.4 1.0 CE1 A:HIS25 2.9 17.5 1.0 C1C A:HEM253 3.0 20.0 1.0 C4B A:HEM253 3.0 20.2 1.0 C1D A:HEM253 3.0 19.4 1.0 C1A A:HEM253 3.0 17.7 1.0 C4C A:HEM253 3.0 20.6 1.0 C4D A:HEM253 3.0 14.9 1.0 C1B A:HEM253 3.0 16.0 1.0 C4A A:HEM253 3.0 14.2 1.0 CD2 A:HIS25 3.0 18.4 1.0 CA A:TYR1 3.1 19.7 1.0 CHA A:HEM253 3.3 15.1 1.0 CHC A:HEM253 3.3 18.7 1.0 CHD A:HEM253 3.3 18.6 1.0 CHB A:HEM253 3.4 14.8 1.0 C A:TYR1 3.9 19.8 1.0 O A:TYR1 4.1 23.2 1.0 ND1 A:HIS25 4.1 17.7 1.0 CG A:HIS25 4.1 20.1 1.0 C2D A:HEM253 4.2 18.6 1.0 C2C A:HEM253 4.2 19.9 1.0 C3C A:HEM253 4.2 19.2 1.0 C3A A:HEM253 4.2 10.6 1.0 C2A A:HEM253 4.2 13.7 1.0 C3B A:HEM253 4.3 17.1 1.0 C3D A:HEM253 4.3 17.9 1.0 C2B A:HEM253 4.3 14.4 1.0 CB A:TYR1 4.4 14.5 1.0 CG A:TYR1 4.7 21.0 1.0 CD2 A:PHE4 4.8 16.3 1.0 N A:PRO2 4.9 18.6 1.0 ND2 A:ASN153 4.9 18.6 1.0

Iron binding site 2 out of 3 in the Structure of Cytochrome F From Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Cytochrome F From Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe253 b:18.1 occ:1.00 FE B:HEM253 0.0 18.1 1.0 NC B:HEM253 1.9 13.7 1.0 NA B:HEM253 1.9 15.1 1.0 ND B:HEM253 2.0 16.3 1.0 NB B:HEM253 2.0 18.2 1.0 N B:TYR1 2.0 14.0 1.0 NE2 B:HIS25 2.0 15.9 1.0 CE1 B:HIS25 2.9 15.9 1.0 C1D B:HEM253 3.0 14.9 1.0 C4C B:HEM253 3.0 17.4 1.0 C4A B:HEM253 3.0 16.3 1.0 C1C B:HEM253 3.0 14.3 1.0 C1A B:HEM253 3.0 15.6 1.0 C1B B:HEM253 3.0 15.0 1.0 C4B B:HEM253 3.0 16.4 1.0 C4D B:HEM253 3.0 15.7 1.0 CD2 B:HIS25 3.1 15.3 1.0 CA B:TYR1 3.1 15.8 1.0 CHD B:HEM253 3.3 18.4 1.0 CHB B:HEM253 3.3 14.3 1.0 CHC B:HEM253 3.4 18.4 1.0 CHA B:HEM253 3.4 15.3 1.0 C B:TYR1 3.8 13.3 1.0 O B:TYR1 4.0 18.0 1.0 ND1 B:HIS25 4.1 16.7 1.0 C2D B:HEM253 4.2 16.2 1.0 C2A B:HEM253 4.2 9.8 1.0 CG B:HIS25 4.2 14.7 1.0 C2C B:HEM253 4.2 17.1 1.0 C3A B:HEM253 4.2 12.4 1.0 C2B B:HEM253 4.2 13.6 1.0 C3C B:HEM253 4.2 17.5 1.0 C3B B:HEM253 4.2 15.7 1.0 C3D B:HEM253 4.3 15.8 1.0 CB B:TYR1 4.4 10.7 1.0 CD2 B:PHE4 4.7 21.4 1.0 N B:PRO2 4.8 15.9 1.0 CG B:TYR1 4.8 15.8 1.0

Iron binding site 3 out of 3 in the Structure of Cytochrome F From Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of Cytochrome F From Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe253 b:22.2 occ:1.00 FE C:HEM253 0.0 22.2 1.0 NC C:HEM253 1.9 17.5 1.0 ND C:HEM253 2.0 19.8 1.0 NB C:HEM253 2.0 16.6 1.0 NA C:HEM253 2.0 18.2 1.0 N C:TYR1 2.0 17.1 1.0 NE2 C:HIS25 2.0 20.4 1.0 C4C C:HEM253 2.9 20.4 1.0 C1D C:HEM253 2.9 21.0 1.0 CE1 C:HIS25 3.0 21.5 1.0 C4A C:HEM253 3.0 15.3 1.0 C1B C:HEM253 3.0 19.3 1.0 C1C C:HEM253 3.0 19.9 1.0 C4D C:HEM253 3.0 16.2 1.0 C4B C:HEM253 3.0 17.8 1.0 C1A C:HEM253 3.0 16.3 1.0 CA C:TYR1 3.1 17.5 1.0 CD2 C:HIS25 3.1 20.1 1.0 CHD C:HEM253 3.3 17.6 1.0 CHB C:HEM253 3.3 17.6 1.0 CHA C:HEM253 3.4 17.6 1.0 CHC C:HEM253 3.4 19.6 1.0 C C:TYR1 3.7 21.0 1.0 O C:TYR1 3.8 23.0 1.0 ND1 C:HIS25 4.1 17.7 1.0 C2D C:HEM253 4.2 21.3 1.0 C3A C:HEM253 4.2 15.2 1.0 CG C:HIS25 4.2 19.6 1.0 C3D C:HEM253 4.2 18.6 1.0 C3C C:HEM253 4.2 19.2 1.0 C2C C:HEM253 4.2 19.9 1.0 C2A C:HEM253 4.2 16.0 1.0 C2B C:HEM253 4.2 20.5 1.0 C3B C:HEM253 4.3 19.8 1.0 CB C:TYR1 4.4 16.7 1.0 CG C:TYR1 4.7 16.7 1.0 N C:PRO2 4.7 20.7 1.0 CD2 C:PHE4 4.8 19.5 1.0 ND2 C:ASN153 4.9 17.9 1.0

G.Sainz, C.J.Carrell, M.V.Ponamarev, G.M.Soriano, W.A.Cramer, J.L.Smith. Interruption of the Internal Water Chain of Cytochrome F Impairs Photosynthetic Function. Biochemistry V. 39 9164 2000.
ISSN: ISSN 0006-2960
PubMed: 10924110
DOI: 10.1021/BI0004596