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Iron in PDB 1fgr: Lipoxygenase-1 (Soybean) at 100K, Q697E Mutant

Enzymatic activity of Lipoxygenase-1 (Soybean) at 100K, Q697E Mutant

All present enzymatic activity of Lipoxygenase-1 (Soybean) at 100K, Q697E Mutant:
1.13.11.12;

Protein crystallography data

The structure of Lipoxygenase-1 (Soybean) at 100K, Q697E Mutant, PDB code: 1fgr was solved by D.R.Tomchick, W.Minor, T.Holman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 94.420, 92.830, 49.360, 90.00, 90.08, 90.00
R / Rfree (%) 19.6 / 22.2

Iron Binding Sites:

The binding sites of Iron atom in the Lipoxygenase-1 (Soybean) at 100K, Q697E Mutant (pdb code 1fgr). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Lipoxygenase-1 (Soybean) at 100K, Q697E Mutant, PDB code: 1fgr:

Iron binding site 1 out of 1 in 1fgr

Go back to Iron Binding Sites List in 1fgr
Iron binding site 1 out of 1 in the Lipoxygenase-1 (Soybean) at 100K, Q697E Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Lipoxygenase-1 (Soybean) at 100K, Q697E Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe840

b:31.6
occ:0.63
NE2 A:HIS504 2.1 30.0 1.0
NE2 A:HIS499 2.1 34.2 0.6
NE2 A:HIS690 2.2 23.6 1.0
O A:HOH1429 2.3 38.2 1.0
NE2 A:HIS499 2.4 36.3 0.4
OXT A:ILE839 2.5 35.2 1.0
CE1 A:HIS499 2.9 35.0 0.6
CE1 A:HIS504 2.9 30.2 1.0
CD2 A:HIS690 3.1 24.1 1.0
CE1 A:HIS499 3.2 34.6 0.4
CD2 A:HIS499 3.2 31.5 0.6
CD2 A:HIS504 3.2 28.0 1.0
CE1 A:HIS690 3.3 22.3 1.0
CD2 A:HIS499 3.4 32.9 0.4
C A:ILE839 3.4 34.4 1.0
OD1 A:ASN694 3.4 25.6 1.0
O A:ILE839 3.6 34.3 1.0
CG A:ASN694 3.9 23.2 1.0
ND1 A:HIS499 4.1 34.4 0.6
ND1 A:HIS504 4.1 29.5 1.0
CG2 A:ILE837 4.2 22.7 1.0
CG A:HIS499 4.2 31.9 0.6
CG A:HIS504 4.3 25.9 1.0
ND1 A:HIS499 4.3 34.2 0.4
CG A:HIS690 4.3 22.1 1.0
CB A:ASN694 4.3 19.6 1.0
ND1 A:HIS690 4.4 23.4 1.0
CG A:HIS499 4.4 32.4 0.4
ND2 A:ASN694 4.7 23.8 1.0
CA A:ILE839 4.8 30.3 1.0
OG1 A:THR503 4.8 24.2 1.0

Reference:

D.R.Tomchick, P.Phan, M.Cymborowski, W.Minor, T.R.Holman. Structural and Functional Characterization of Second-Coordination Sphere Mutants of Soybean Lipoxygenase-1. Biochemistry V. 40 7509 2001.
ISSN: ISSN 0006-2960
PubMed: 11412104
DOI: 10.1021/BI002893D
Page generated: Sat Aug 3 05:02:56 2024

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