Atomistry » Iron » PDB 1fz2-1gek » 1gdl
Atomistry »
  Iron »
    PDB 1fz2-1gek »
      1gdl »

Iron in PDB 1gdl: Crystal Structure of Ferric Complexes of the Yellow Lupin Leghemoglobin with Isoquinoline at 1.8 Angstroms Resolution (Russian)

Protein crystallography data

The structure of Crystal Structure of Ferric Complexes of the Yellow Lupin Leghemoglobin with Isoquinoline at 1.8 Angstroms Resolution (Russian), PDB code: 1gdl was solved by E.Harutyunyan, T.Safonova, I.Kuranova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 1.80
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 93.470, 51.980, 38.320, 90.00, 98.80, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Ferric Complexes of the Yellow Lupin Leghemoglobin with Isoquinoline at 1.8 Angstroms Resolution (Russian) (pdb code 1gdl). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Ferric Complexes of the Yellow Lupin Leghemoglobin with Isoquinoline at 1.8 Angstroms Resolution (Russian), PDB code: 1gdl:

Iron binding site 1 out of 1 in 1gdl

Go back to Iron Binding Sites List in 1gdl
Iron binding site 1 out of 1 in the Crystal Structure of Ferric Complexes of the Yellow Lupin Leghemoglobin with Isoquinoline at 1.8 Angstroms Resolution (Russian)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Ferric Complexes of the Yellow Lupin Leghemoglobin with Isoquinoline at 1.8 Angstroms Resolution (Russian) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe154

b:14.2
occ:1.00
FE A:HEM154 0.0 14.2 1.0
NA A:HEM154 1.8 12.4 1.0
N A:NO155 2.0 4.0 1.0
NB A:HEM154 2.0 9.6 1.0
NC A:HEM154 2.1 8.4 1.0
ND A:HEM154 2.1 11.2 1.0
NE2 A:HIS97 2.2 11.2 1.0
C4A A:HEM154 2.8 14.2 1.0
C1A A:HEM154 2.9 12.4 1.0
C1B A:HEM154 3.0 8.3 1.0
CE1 A:HIS97 3.0 16.3 1.0
C4D A:HEM154 3.1 6.3 1.0
C4B A:HEM154 3.1 3.5 1.0
C4C A:HEM154 3.1 8.0 1.0
C1C A:HEM154 3.1 1.5 1.0
C1D A:HEM154 3.2 7.6 1.0
O A:NO155 3.2 20.4 1.0
CD2 A:HIS97 3.3 10.2 1.0
CHB A:HEM154 3.3 10.8 1.0
CHA A:HEM154 3.4 10.3 1.0
CHC A:HEM154 3.5 6.6 1.0
CHD A:HEM154 3.5 7.7 1.0
C2A A:HEM154 4.0 12.2 1.0
C3A A:HEM154 4.1 13.0 1.0
CE1 A:HIS63 4.1 6.4 1.0
ND1 A:HIS97 4.2 15.8 1.0
C2B A:HEM154 4.2 9.1 1.0
C3B A:HEM154 4.3 4.2 1.0
C3D A:HEM154 4.3 11.0 1.0
C2C A:HEM154 4.3 2.6 1.0
CG A:HIS97 4.3 10.1 1.0
C3C A:HEM154 4.4 1.8 1.0
C2D A:HEM154 4.4 10.6 1.0
NE2 A:HIS63 4.7 8.6 1.0
CG2 A:VAL67 4.9 14.5 1.0

Reference:

E.H.Harutyunyan, T.N.Safonova, I.P.Kuranova, A.N.Popov, A.V.Teplyakov, G.V.Obmolova, B.K.Valnshtein, G.G.Dodson, J.C.Wilson. The Binding of Carbon Monoxide and Nitric Oxide to Leghaemoglobin in Comparison with Other Haemoglobins. J.Mol.Biol. V. 264 152 1996.
ISSN: ISSN 0022-2836
PubMed: 8950274
DOI: 10.1006/JMBI.1996.0630
Page generated: Sun Dec 13 14:15:18 2020

Last articles

Cl in 6COG
Cl in 6CST
Cl in 6CTW
Cl in 6CTZ
Cl in 6CTT
Cl in 6CSP
Cl in 6CU9
Cl in 6CTX
Cl in 6CTU
Cl in 6CTP
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy