Iron in PDB 1gx7: Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase

All present enzymatic activity of Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase:
1.18.99.1;

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 18;

Binding sites:

The binding sites of Iron atom in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase (pdb code 1gx7). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 18 binding sites of Iron where determined in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase, PDB code: 1gx7:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 18 in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1 b:0.0 occ:1.00 FE1 A:SF41 0.0 0.0 1.0 SG A:CYS76 2.2 0.0 1.0 S3 A:SF41 2.3 0.0 1.0 S4 A:SF41 2.3 0.0 1.0 S2 A:SF41 2.3 0.0 1.0 FE4 A:SF41 2.6 0.0 1.0 FE2 A:SF41 2.6 0.0 1.0 FE3 A:SF41 2.6 0.0 1.0 CB A:CYS76 3.1 0.0 1.0 CA A:CYS76 3.8 0.0 1.0 S1 A:SF41 3.9 0.0 1.0 O A:LYS34 3.9 0.0 1.0 CA A:CYS35 4.5 0.0 1.0 SG A:CYS35 4.5 0.0 1.0 SG A:CYS41 4.6 0.0 1.0 SG A:CYS38 4.6 0.0 1.0 N A:CYS76 4.7 0.0 1.0 CB A:CYS35 4.7 0.0 1.0 H A:ILE36 4.8 0.0 1.0 C A:LYS34 4.9 0.0 1.0 SG E:CYS100 5.0 0.0 1.0 CD A:PRO77 5.0 0.0 1.0

Iron binding site 2 out of 18 in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1 b:0.0 occ:1.00 FE2 A:SF41 0.0 0.0 1.0 SG A:CYS41 2.2 0.0 1.0 S3 A:SF41 2.3 0.0 1.0 S4 A:SF41 2.3 0.0 1.0 S1 A:SF41 2.3 0.0 1.0 FE4 A:SF41 2.5 0.0 1.0 FE1 A:SF41 2.6 0.0 1.0 FE3 A:SF41 2.7 0.0 1.0 CB A:CYS41 3.2 0.0 1.0 H A:CYS41 3.5 0.0 1.0 S2 A:SF41 3.9 0.0 1.0 H A:SER42 4.2 0.0 1.0 HG A:SER42 4.3 0.0 1.0 N A:CYS41 4.3 0.0 1.0 CD1 A:ILE81 4.3 0.0 1.0 OG A:SER42 4.3 0.0 1.0 CA A:CYS41 4.4 0.0 1.0 SG A:CYS76 4.5 0.0 1.0 NE2 A:HIS58 4.5 0.0 1.0 CB A:CYS76 4.5 0.0 1.0 SG A:CYS35 4.5 0.0 1.0 SG A:CYS38 4.7 0.0 1.0 O A:CYS72 4.8 0.0 1.0 CA A:CYS76 4.9 0.0 1.0 CD2 A:HIS58 4.9 0.0 1.0 H A:ASP39 4.9 0.0 1.0 CE1 A:HIS58 5.0 0.0 1.0 N A:SER42 5.0 0.0 1.0

Iron binding site 3 out of 18 in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1 b:0.0 occ:1.00 FE3 A:SF41 0.0 0.0 1.0 SG A:CYS38 2.3 0.0 1.0 S4 A:SF41 2.3 0.0 1.0 S1 A:SF41 2.3 0.0 1.0 S2 A:SF41 2.3 0.0 1.0 FE4 A:SF41 2.6 0.0 1.0 FE1 A:SF41 2.6 0.0 1.0 FE2 A:SF41 2.7 0.0 1.0 CB A:CYS38 3.5 0.0 1.0 H A:CYS38 3.6 0.0 1.0 N A:CYS38 3.8 0.0 1.0 O A:ILE36 3.8 0.0 1.0 S3 A:SF41 3.9 0.0 1.0 CA A:CYS38 4.1 0.0 1.0 H A:ASP39 4.1 0.0 1.0 OG1 A:THR40 4.2 0.0 1.0 H A:CYS41 4.2 0.0 1.0 H A:THR40 4.3 0.0 1.0 H A:ILE36 4.3 0.0 1.0 CMB E:HEC109 4.3 0.0 1.0 N A:ASP39 4.4 0.0 1.0 C A:CYS38 4.5 0.0 1.0 SG A:CYS35 4.6 0.0 1.0 SG A:CYS41 4.6 0.0 1.0 SG A:CYS76 4.6 0.0 1.0 HG1 A:THR40 4.7 0.0 1.0 CBB E:HEC109 4.9 0.0 1.0 C A:GLY37 4.9 0.0 1.0 N A:THR40 5.0 0.0 1.0 C A:ILE36 5.0 0.0 1.0

Iron binding site 4 out of 18 in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1 b:0.0 occ:1.00 FE4 A:SF41 0.0 0.0 1.0 SG A:CYS35 2.2 0.0 1.0 S3 A:SF41 2.3 0.0 1.0 S1 A:SF41 2.3 0.0 1.0 S2 A:SF41 2.3 0.0 1.0 FE2 A:SF41 2.5 0.0 1.0 FE3 A:SF41 2.6 0.0 1.0 FE1 A:SF41 2.6 0.0 1.0 CB A:CYS35 3.2 0.0 1.0 CA A:CYS35 3.5 0.0 1.0 H A:ILE36 3.6 0.0 1.0 O A:ILE36 3.7 0.0 1.0 S4 A:SF41 3.8 0.0 1.0 H A:CYS38 4.0 0.0 1.0 N A:ILE36 4.2 0.0 1.0 C A:CYS35 4.3 0.0 1.0 CE1 A:HIS58 4.3 0.0 1.0 N A:CYS38 4.3 0.0 1.0 ND1 A:HIS58 4.4 0.0 1.0 NE2 A:HIS58 4.4 0.0 1.0 C A:ILE36 4.5 0.0 1.0 SG A:CYS41 4.5 0.0 1.0 O A:LYS34 4.6 0.0 1.0 SG A:CYS38 4.6 0.0 1.0 CD2 A:HIS58 4.6 0.0 1.0 CG A:HIS58 4.6 0.0 1.0 SG A:CYS76 4.6 0.0 1.0 HD1 A:HIS58 4.7 0.0 1.0 N A:CYS35 4.7 0.0 1.0 H A:ASP39 4.8 0.0 1.0

Iron binding site 5 out of 18 in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe2 b:0.0 occ:1.00 FE1 A:SF42 0.0 0.0 1.0 SG A:CYS72 2.2 0.0 1.0 S3 A:SF42 2.3 0.0 1.0 S4 A:SF42 2.3 0.0 1.0 S2 A:SF42 2.3 0.0 1.0 FE3 A:SF42 2.5 0.0 1.0 FE4 A:SF42 2.5 0.0 1.0 FE2 A:SF42 2.6 0.0 1.0 CB A:CYS72 3.2 0.0 1.0 O A:GLY70 3.4 0.0 1.0 H A:CYS72 3.5 0.0 1.0 S1 A:SF42 3.8 0.0 1.0 N A:CYS72 4.3 0.0 1.0 CA A:CYS72 4.4 0.0 1.0 SG A:CYS66 4.5 0.0 1.0 SG A:CYS69 4.5 0.0 1.0 H A:GLY70 4.5 0.0 1.0 C A:GLY70 4.6 0.0 1.0 SG A:CYS45 4.7 0.0 1.0

Iron binding site 6 out of 18 in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe2 b:0.0 occ:1.00 FE2 A:SF42 0.0 0.0 1.0 SG A:CYS45 2.2 0.0 1.0 S3 A:SF42 2.3 0.0 1.0 S4 A:SF42 2.3 0.0 1.0 S1 A:SF42 2.3 0.0 1.0 FE3 A:SF42 2.5 0.0 1.0 FE4 A:SF42 2.6 0.0 1.0 FE1 A:SF42 2.6 0.0 1.0 CB A:CYS45 3.3 0.0 1.0 CA A:CYS45 3.6 0.0 1.0 S2 A:SF42 3.9 0.0 1.0 CD1 A:ILE50 4.2 0.0 1.0 CD A:PRO46 4.4 0.0 1.0 SG A:CYS66 4.5 0.0 1.0 O A:ALA49 4.5 0.0 1.0 C A:CYS45 4.5 0.0 1.0 SG A:CYS69 4.5 0.0 1.0 SG A:CYS72 4.6 0.0 1.0 CA A:CYS66 4.7 0.0 1.0 CB A:ILE50 4.7 0.0 1.0 N A:CYS45 4.7 0.0 1.0 CG1 A:ILE50 4.8 0.0 1.0 N A:PRO46 4.8 0.0 1.0 CB A:CYS66 4.8 0.0 1.0 HG1 A:THR47 5.0 0.0 1.0

Iron binding site 7 out of 18 in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe2 b:0.0 occ:1.00 FE3 A:SF42 0.0 0.0 1.0 SG A:CYS66 2.2 0.0 1.0 S4 A:SF42 2.3 0.0 1.0 S2 A:SF42 2.3 0.0 1.0 S1 A:SF42 2.3 0.0 1.0 FE1 A:SF42 2.5 0.0 1.0 FE2 A:SF42 2.5 0.0 1.0 FE4 A:SF42 2.7 0.0 1.0 CB A:CYS66 3.3 0.0 1.0 CA A:CYS66 3.5 0.0 1.0 S3 A:SF42 3.8 0.0 1.0 H A:CYS69 3.9 0.0 1.0 C A:CYS66 4.0 0.0 1.0 H A:ILE67 4.3 0.0 1.0 H A:ASN68 4.4 0.0 1.0 N A:ILE67 4.4 0.0 1.0 SG A:CYS72 4.5 0.0 1.0 SG A:CYS45 4.5 0.0 1.0 O A:CYS66 4.5 0.0 1.0 CG1 A:VAL28 4.7 0.0 1.0 SG A:CYS69 4.7 0.0 1.0 N A:CYS69 4.7 0.0 1.0 N A:ASN68 4.8 0.0 1.0 H A:GLY70 4.8 0.0 1.0 N A:CYS66 4.8 0.0 1.0 O A:GLY70 5.0 0.0 1.0

Iron binding site 8 out of 18 in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe2 b:0.0 occ:1.00 FE4 A:SF42 0.0 0.0 1.0 SG A:CYS69 2.2 0.0 1.0 S3 A:SF42 2.3 0.0 1.0 S1 A:SF42 2.3 0.0 1.0 S2 A:SF42 2.3 0.0 1.0 FE1 A:SF42 2.5 0.0 1.0 FE2 A:SF42 2.6 0.0 1.0 FE3 A:SF42 2.7 0.0 1.0 CB A:CYS69 3.2 0.0 1.0 O A:GLY70 3.3 0.0 1.0 H A:CYS69 3.4 0.0 1.0 H A:GLY70 3.5 0.0 1.0 N A:CYS69 3.9 0.0 1.0 S4 A:SF42 3.9 0.0 1.0 CD A:PRO46 4.0 0.0 1.0 CA A:CYS69 4.0 0.0 1.0 N A:GLY70 4.1 0.0 1.0 C A:GLY70 4.2 0.0 1.0 H A:CYS72 4.3 0.0 1.0 C A:CYS69 4.4 0.0 1.0 SG A:CYS72 4.4 0.0 1.0 SG A:CYS45 4.5 0.0 1.0 CA A:CYS45 4.7 0.0 1.0 SG A:CYS66 4.7 0.0 1.0 H A:ILE67 4.7 0.0 1.0 O A:TYR44 4.7 0.0 1.0 CB A:GLN71 4.8 0.0 1.0 CA A:GLY70 4.8 0.0 1.0 CG A:PRO46 5.0 0.0 1.0

Iron binding site 9 out of 18 in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe3 b:0.0 occ:1.00 FE1 A:SF43 0.0 0.0 1.0 SG A:CYS234 2.3 0.0 1.0 S3 A:SF43 2.3 0.0 1.0 S2 A:SF43 2.3 0.0 1.0 S4 A:SF43 2.3 0.0 1.0 FE4 A:SF43 2.5 0.0 1.0 FE2 A:SF43 2.6 0.0 1.0 FE3 A:SF43 2.6 0.0 1.0 CB A:CYS234 3.2 0.0 1.0 O A:CYS69 3.3 0.0 1.0 S1 A:SF43 3.9 0.0 1.0 C A:CYS69 4.1 0.0 1.0 CA A:CYS234 4.2 0.0 1.0 CA A:CYS69 4.2 0.0 1.0 SG A:CYS378 4.5 0.0 1.0 SG A:CYS179 4.5 0.0 1.0 SG A:CYS382 4.7 0.0 1.0 CB A:CYS69 4.8 0.0 1.0 H A:GLY181 4.8 0.0 1.0 CD A:PRO180 4.9 0.0 1.0 N A:CYS234 4.9 0.0 1.0

Iron binding site 10 out of 18 in the Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Best Model of the Electron Transfer Complex Between Cytochrome C3 and [Fe]-Hydrogenase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe3 b:0.0 occ:1.00 FE2 A:SF43 0.0 0.0 1.0 SG A:CYS179 2.3 0.0 1.0 S3 A:SF43 2.3 0.0 1.0 S4 A:SF43 2.3 0.0 1.0 S1 A:SF43 2.3 0.0 1.0 FE4 A:SF43 2.5 0.0 1.0 FE1 A:SF43 2.6 0.0 1.0 FE3 A:SF43 2.6 0.0 1.0 CB A:CYS179 3.4 0.0 1.0 O A:ALA377 3.5 0.0 1.0 H A:ALA377 3.6 0.0 1.0 S2 A:SF43 3.9 0.0 1.0 CA A:CYS179 4.0 0.0 1.0 H A:GLY181 4.1 0.0 1.0 C A:ALA377 4.2 0.0 1.0 N A:ALA377 4.3 0.0 1.0 SD A:MET376 4.4 0.0 1.0 CB A:ALA377 4.5 0.0 1.0 SG A:CYS378 4.5 0.0 1.0 SG A:CYS234 4.6 0.0 1.0 CA A:ALA377 4.6 0.0 1.0 SG A:CYS382 4.7 0.0 1.0 C A:CYS179 4.7 0.0 1.0 CD A:PRO180 4.8 0.0 1.0 N A:PRO180 4.9 0.0 1.0 H A:TRP182 5.0 0.0 1.0 N A:GLY181 5.0 0.0 1.0

L.Elantak, X.Morelli, O.Bornet, C.Hatchikian, M.Czjzek, A.Dolla, F.Guerlesquin. The Cytochrome C(3)-[Fe]-Hydrogenase Electron-Transfer Complex: Structural Model By uc(Nmr) Restrained Docking Febs Lett. V. 548 1 2003.
ISSN: ISSN 0014-5793
PubMed: 12885397
DOI: 10.1016/S0014-5793(03)00718-X