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Iron in PDB 1h2l: Factor Inhibiting Hif-1 Alpha in Complex with Hif-1 Alpha Fragment Peptide

Protein crystallography data

The structure of Factor Inhibiting Hif-1 Alpha in Complex with Hif-1 Alpha Fragment Peptide, PDB code: 1h2l was solved by J.M.Elkins, K.S.Hewitson, L.A.Mcneill, I.Schlemminger, J.F.Seibel, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.00 / 2.25
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 86.264, 86.264, 147.914, 90.00, 90.00, 90.00
R / Rfree (%) 18.3 / 21.7

Iron Binding Sites:

The binding sites of Iron atom in the Factor Inhibiting Hif-1 Alpha in Complex with Hif-1 Alpha Fragment Peptide (pdb code 1h2l). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Factor Inhibiting Hif-1 Alpha in Complex with Hif-1 Alpha Fragment Peptide, PDB code: 1h2l:

Iron binding site 1 out of 1 in 1h2l

Go back to Iron Binding Sites List in 1h2l
Iron binding site 1 out of 1 in the Factor Inhibiting Hif-1 Alpha in Complex with Hif-1 Alpha Fragment Peptide


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Factor Inhibiting Hif-1 Alpha in Complex with Hif-1 Alpha Fragment Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1350

b:22.1
occ:1.00
NE2 A:HIS279 2.1 25.1 1.0
NE2 A:HIS199 2.1 24.4 1.0
O1 A:AKG1351 2.1 27.6 1.0
OD2 A:ASP201 2.1 20.6 1.0
O5 A:AKG1351 2.2 23.7 1.0
C1 A:AKG1351 2.7 25.6 1.0
C2 A:AKG1351 2.8 24.1 1.0
CE1 A:HIS199 3.0 22.9 1.0
CE1 A:HIS279 3.0 26.5 1.0
CD2 A:HIS279 3.1 26.2 1.0
CD2 A:HIS199 3.1 21.5 1.0
CG A:ASP201 3.1 21.1 1.0
OD1 A:ASP201 3.4 23.2 1.0
O A:HOH2065 3.9 28.8 1.0
O2 A:AKG1351 4.1 28.0 1.0
ND1 A:HIS199 4.1 22.0 1.0
ND1 A:HIS279 4.1 25.0 1.0
CG A:HIS279 4.2 23.5 1.0
CG A:HIS199 4.2 23.0 1.0
CZ2 A:TRP296 4.3 25.9 1.0
C3 A:AKG1351 4.3 23.5 1.0
CB A:ASP201 4.5 22.9 1.0
ND2 S:ASN803 4.7 29.4 1.0
CG S:ASN803 4.8 33.5 1.0
CB S:ASN803 4.9 35.4 1.0
C4 A:AKG1351 4.9 22.1 1.0

Reference:

J.M.Elkins, K.S.Hewitson, L.A.Mcneill, J.F.Seibel, I.Schlemminger, C.Pugh, P.Ratcliffe, C.J.Schofield. Structure of Factor-Inhibiting Hypoxia-Inducible Factor (Hif) Reveals Mechanism of Oxidative Modification of Hif-1ALPHA J.Biol.Chem. V. 278 1802 2003.
ISSN: ISSN 0021-9258
PubMed: 12446723
DOI: 10.1074/JBC.C200644200
Page generated: Sat Aug 3 06:51:33 2024

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