Iron in PDB 1hho: Structure of Human Oxyhaemoglobin at 2.1 Angstroms Resolution
Protein crystallography data
The structure of Structure of Human Oxyhaemoglobin at 2.1 Angstroms Resolution, PDB code: 1hho
was solved by
B.Shaanan,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
N/A /
2.10
|
Space group
|
P 41 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
53.700,
53.700,
193.800,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
22.3 /
n/a
|
Iron Binding Sites:
The binding sites of Iron atom in the Structure of Human Oxyhaemoglobin at 2.1 Angstroms Resolution
(pdb code 1hho). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
Structure of Human Oxyhaemoglobin at 2.1 Angstroms Resolution, PDB code: 1hho:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 1hho
Go back to
Iron Binding Sites List in 1hho
Iron binding site 1 out
of 2 in the Structure of Human Oxyhaemoglobin at 2.1 Angstroms Resolution
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Structure of Human Oxyhaemoglobin at 2.1 Angstroms Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe143
b:27.4
occ:1.00
|
FE
|
A:HEM143
|
0.0
|
27.4
|
1.0
|
O1
|
A:OXY150
|
1.7
|
17.8
|
1.0
|
ND
|
A:HEM143
|
1.9
|
36.4
|
1.0
|
NE2
|
A:HIS87
|
1.9
|
19.6
|
1.0
|
NC
|
A:HEM143
|
2.0
|
23.5
|
1.0
|
NA
|
A:HEM143
|
2.0
|
29.8
|
1.0
|
NB
|
A:HEM143
|
2.0
|
33.4
|
1.0
|
O2
|
A:OXY150
|
2.8
|
33.8
|
1.0
|
CE1
|
A:HIS87
|
2.9
|
25.2
|
1.0
|
C4D
|
A:HEM143
|
2.9
|
41.0
|
1.0
|
C1C
|
A:HEM143
|
3.0
|
36.7
|
1.0
|
C1A
|
A:HEM143
|
3.0
|
36.6
|
1.0
|
C1D
|
A:HEM143
|
3.0
|
29.3
|
1.0
|
CD2
|
A:HIS87
|
3.0
|
19.4
|
1.0
|
C4B
|
A:HEM143
|
3.1
|
35.7
|
1.0
|
C4C
|
A:HEM143
|
3.1
|
13.9
|
1.0
|
C4A
|
A:HEM143
|
3.1
|
18.2
|
1.0
|
C1B
|
A:HEM143
|
3.1
|
24.2
|
1.0
|
CHA
|
A:HEM143
|
3.3
|
37.6
|
1.0
|
CHC
|
A:HEM143
|
3.4
|
15.4
|
1.0
|
CHD
|
A:HEM143
|
3.5
|
23.8
|
1.0
|
CHB
|
A:HEM143
|
3.5
|
20.8
|
1.0
|
ND1
|
A:HIS87
|
4.1
|
18.1
|
1.0
|
CG
|
A:HIS87
|
4.1
|
8.9
|
1.0
|
C3D
|
A:HEM143
|
4.2
|
34.3
|
1.0
|
C2D
|
A:HEM143
|
4.2
|
25.8
|
1.0
|
C2C
|
A:HEM143
|
4.2
|
33.1
|
1.0
|
C2A
|
A:HEM143
|
4.3
|
44.7
|
1.0
|
C3C
|
A:HEM143
|
4.3
|
28.4
|
1.0
|
C3A
|
A:HEM143
|
4.3
|
25.8
|
1.0
|
NE2
|
A:HIS58
|
4.3
|
25.4
|
1.0
|
C3B
|
A:HEM143
|
4.3
|
24.7
|
1.0
|
C2B
|
A:HEM143
|
4.3
|
19.6
|
1.0
|
CG2
|
A:VAL62
|
4.8
|
16.8
|
1.0
|
CE1
|
A:HIS58
|
4.9
|
19.2
|
1.0
|
|
Iron binding site 2 out
of 2 in 1hho
Go back to
Iron Binding Sites List in 1hho
Iron binding site 2 out
of 2 in the Structure of Human Oxyhaemoglobin at 2.1 Angstroms Resolution
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Structure of Human Oxyhaemoglobin at 2.1 Angstroms Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe147
b:36.7
occ:1.00
|
FE
|
B:HEM147
|
0.0
|
36.7
|
1.0
|
O1
|
B:OXY150
|
1.9
|
42.1
|
1.0
|
NA
|
B:HEM147
|
1.9
|
35.1
|
1.0
|
NB
|
B:HEM147
|
1.9
|
30.6
|
1.0
|
ND
|
B:HEM147
|
1.9
|
26.5
|
1.0
|
NC
|
B:HEM147
|
2.1
|
41.2
|
1.0
|
NE2
|
B:HIS92
|
2.1
|
17.5
|
1.0
|
C1A
|
B:HEM147
|
2.9
|
28.9
|
1.0
|
C4D
|
B:HEM147
|
2.9
|
15.8
|
1.0
|
C4B
|
B:HEM147
|
3.0
|
40.0
|
1.0
|
C1B
|
B:HEM147
|
3.0
|
13.6
|
1.0
|
C4A
|
B:HEM147
|
3.0
|
51.2
|
1.0
|
C1D
|
B:HEM147
|
3.0
|
21.3
|
1.0
|
O2
|
B:OXY150
|
3.1
|
37.4
|
1.0
|
CD2
|
B:HIS92
|
3.1
|
24.8
|
1.0
|
C1C
|
B:HEM147
|
3.1
|
25.9
|
1.0
|
C4C
|
B:HEM147
|
3.1
|
16.4
|
1.0
|
CE1
|
B:HIS92
|
3.1
|
30.8
|
1.0
|
CHA
|
B:HEM147
|
3.3
|
23.5
|
1.0
|
CHB
|
B:HEM147
|
3.4
|
43.2
|
1.0
|
CHC
|
B:HEM147
|
3.4
|
24.6
|
1.0
|
CHD
|
B:HEM147
|
3.5
|
8.9
|
1.0
|
C3D
|
B:HEM147
|
4.1
|
29.0
|
1.0
|
C2A
|
B:HEM147
|
4.2
|
41.0
|
1.0
|
C2B
|
B:HEM147
|
4.2
|
23.3
|
1.0
|
C3B
|
B:HEM147
|
4.2
|
41.6
|
1.0
|
NE2
|
B:HIS63
|
4.2
|
39.4
|
1.0
|
C2D
|
B:HEM147
|
4.2
|
41.7
|
1.0
|
C3A
|
B:HEM147
|
4.2
|
28.7
|
1.0
|
CG
|
B:HIS92
|
4.2
|
32.8
|
1.0
|
ND1
|
B:HIS92
|
4.3
|
30.9
|
1.0
|
C2C
|
B:HEM147
|
4.3
|
14.9
|
1.0
|
C3C
|
B:HEM147
|
4.3
|
30.2
|
1.0
|
CG2
|
B:VAL67
|
4.7
|
23.9
|
1.0
|
|
Reference:
B.Shaanan,
B.Shaanan.
N/A N/A.
ISSN: ISSN 0022-2836
PubMed: 6644819
DOI: 10.1016/S0022-2836(83)80313-1
Page generated: Sat Aug 3 07:41:40 2024
|