Iron in PDB 1hip: Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein
Protein crystallography data
The structure of Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein, PDB code: 1hip
was solved by
C.W.Carterjunior,
J.Kraut,
S.T.Freer,
N.-H.Xuong,
R.A.Alden,
R.G.Bartsch,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
N/A /
2.00
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
42.700,
41.860,
38.080,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
n/a /
n/a
|
Iron Binding Sites:
The binding sites of Iron atom in the Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein
(pdb code 1hip). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the
Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein, PDB code: 1hip:
Jump to Iron binding site number:
1;
2;
3;
4;
Iron binding site 1 out
of 4 in 1hip
Go back to
Iron Binding Sites List in 1hip
Iron binding site 1 out
of 4 in the Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe86
b:0.0
occ:1.00
|
FE1
|
A:SF486
|
0.0
|
0.0
|
1.0
|
SG
|
A:CYS43
|
2.2
|
0.0
|
1.0
|
S3
|
A:SF486
|
2.2
|
0.0
|
1.0
|
S4
|
A:SF486
|
2.3
|
0.0
|
1.0
|
S2
|
A:SF486
|
2.3
|
0.0
|
1.0
|
FE2
|
A:SF486
|
2.7
|
0.0
|
1.0
|
FE4
|
A:SF486
|
2.8
|
0.0
|
1.0
|
FE3
|
A:SF486
|
2.8
|
0.0
|
1.0
|
CB
|
A:CYS43
|
3.0
|
0.0
|
1.0
|
CA
|
A:CYS43
|
3.6
|
0.0
|
1.0
|
S1
|
A:SF486
|
3.9
|
0.0
|
1.0
|
N
|
A:CYS43
|
4.2
|
0.0
|
1.0
|
CD1
|
A:ILE71
|
4.6
|
0.0
|
1.0
|
CA
|
A:TRP76
|
4.6
|
0.0
|
1.0
|
SG
|
A:CYS46
|
4.7
|
0.0
|
1.0
|
CG1
|
A:ILE71
|
4.7
|
0.0
|
1.0
|
CD1
|
A:TYR19
|
4.7
|
0.0
|
1.0
|
C
|
A:CYS43
|
4.8
|
0.0
|
1.0
|
CE1
|
A:TYR19
|
4.8
|
0.0
|
1.0
|
SG
|
A:CYS77
|
4.8
|
0.0
|
1.0
|
N
|
A:TRP76
|
4.8
|
0.0
|
1.0
|
CB
|
A:CYS46
|
4.8
|
0.0
|
1.0
|
O
|
A:GLY75
|
4.8
|
0.0
|
1.0
|
N
|
A:CYS77
|
4.8
|
0.0
|
1.0
|
C
|
A:TRP76
|
4.9
|
0.0
|
1.0
|
C
|
A:GLY75
|
4.9
|
0.0
|
1.0
|
SG
|
A:CYS63
|
4.9
|
0.0
|
1.0
|
CB
|
A:ILE71
|
5.0
|
0.0
|
1.0
|
O
|
A:CYS43
|
5.0
|
0.0
|
1.0
|
|
Iron binding site 2 out
of 4 in 1hip
Go back to
Iron Binding Sites List in 1hip
Iron binding site 2 out
of 4 in the Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe86
b:0.0
occ:1.00
|
FE2
|
A:SF486
|
0.0
|
0.0
|
1.0
|
S4
|
A:SF486
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS46
|
2.2
|
0.0
|
1.0
|
S3
|
A:SF486
|
2.2
|
0.0
|
1.0
|
S1
|
A:SF486
|
2.3
|
0.0
|
1.0
|
FE3
|
A:SF486
|
2.7
|
0.0
|
1.0
|
FE1
|
A:SF486
|
2.7
|
0.0
|
1.0
|
FE4
|
A:SF486
|
2.7
|
0.0
|
1.0
|
CB
|
A:CYS46
|
3.2
|
0.0
|
1.0
|
S2
|
A:SF486
|
3.8
|
0.0
|
1.0
|
CB
|
A:PHE48
|
4.3
|
0.0
|
1.0
|
CA
|
A:TRP80
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS46
|
4.5
|
0.0
|
1.0
|
CD2
|
A:PHE48
|
4.6
|
0.0
|
1.0
|
SG
|
A:CYS63
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS43
|
4.7
|
0.0
|
1.0
|
SG
|
A:CYS43
|
4.7
|
0.0
|
1.0
|
SG
|
A:CYS77
|
4.7
|
0.0
|
1.0
|
CB
|
A:CYS43
|
4.8
|
0.0
|
1.0
|
N
|
A:MET49
|
4.9
|
0.0
|
1.0
|
N
|
A:TRP80
|
4.9
|
0.0
|
1.0
|
CD1
|
A:TRP80
|
4.9
|
0.0
|
1.0
|
N
|
A:PHE48
|
5.0
|
0.0
|
1.0
|
CG
|
A:PHE48
|
5.0
|
0.0
|
1.0
|
|
Iron binding site 3 out
of 4 in 1hip
Go back to
Iron Binding Sites List in 1hip
Iron binding site 3 out
of 4 in the Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe86
b:0.0
occ:1.00
|
FE3
|
A:SF486
|
0.0
|
0.0
|
1.0
|
S2
|
A:SF486
|
2.1
|
0.0
|
1.0
|
S4
|
A:SF486
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS63
|
2.3
|
0.0
|
1.0
|
S1
|
A:SF486
|
2.4
|
0.0
|
1.0
|
FE2
|
A:SF486
|
2.7
|
0.0
|
1.0
|
FE4
|
A:SF486
|
2.7
|
0.0
|
1.0
|
FE1
|
A:SF486
|
2.8
|
0.0
|
1.0
|
CB
|
A:CYS63
|
3.4
|
0.0
|
1.0
|
S3
|
A:SF486
|
3.8
|
0.0
|
1.0
|
CB
|
A:PHE48
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS63
|
4.5
|
0.0
|
1.0
|
SG
|
A:CYS77
|
4.5
|
0.0
|
1.0
|
SG
|
A:CYS46
|
4.6
|
0.0
|
1.0
|
CD2
|
A:PHE66
|
4.7
|
0.0
|
1.0
|
CG1
|
A:ILE71
|
4.7
|
0.0
|
1.0
|
SG
|
A:CYS43
|
4.8
|
0.0
|
1.0
|
O
|
A:PHE48
|
5.0
|
0.0
|
1.0
|
|
Iron binding site 4 out
of 4 in 1hip
Go back to
Iron Binding Sites List in 1hip
Iron binding site 4 out
of 4 in the Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe86
b:0.0
occ:1.00
|
FE4
|
A:SF486
|
0.0
|
0.0
|
1.0
|
S1
|
A:SF486
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS77
|
2.2
|
0.0
|
1.0
|
S2
|
A:SF486
|
2.2
|
0.0
|
1.0
|
S3
|
A:SF486
|
2.3
|
0.0
|
1.0
|
FE3
|
A:SF486
|
2.7
|
0.0
|
1.0
|
FE2
|
A:SF486
|
2.7
|
0.0
|
1.0
|
FE1
|
A:SF486
|
2.8
|
0.0
|
1.0
|
CB
|
A:CYS77
|
3.2
|
0.0
|
1.0
|
S4
|
A:SF486
|
3.8
|
0.0
|
1.0
|
N
|
A:CYS77
|
3.9
|
0.0
|
1.0
|
CA
|
A:CYS77
|
4.0
|
0.0
|
1.0
|
O
|
A:CYS77
|
4.4
|
0.0
|
1.0
|
C
|
A:CYS77
|
4.5
|
0.0
|
1.0
|
N
|
A:TRP80
|
4.6
|
0.0
|
1.0
|
CB
|
A:SER79
|
4.6
|
0.0
|
1.0
|
C
|
A:TRP76
|
4.6
|
0.0
|
1.0
|
SG
|
A:CYS63
|
4.7
|
0.0
|
1.0
|
SG
|
A:CYS46
|
4.7
|
0.0
|
1.0
|
C
|
A:SER79
|
4.7
|
0.0
|
1.0
|
SG
|
A:CYS43
|
4.7
|
0.0
|
1.0
|
CA
|
A:TRP80
|
4.9
|
0.0
|
1.0
|
CD1
|
A:TYR19
|
4.9
|
0.0
|
1.0
|
N
|
A:SER79
|
4.9
|
0.0
|
1.0
|
CA
|
A:SER79
|
5.0
|
0.0
|
1.0
|
|
Reference:
C.W.Carter Jr.,
J.Kraut,
S.T.Freer,
N.H.Xuong,
R.A.Alden,
R.G.Bartsch.
Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein. J.Biol.Chem. V. 249 4212 1974.
ISSN: ISSN 0021-9258
PubMed: 4855287
Page generated: Sat Aug 3 07:41:40 2024
|