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Iron in PDB 1hu9: Lipoxygenase-3 (Soybean) Complex with 4-Hydroperoxy-2-Methoxy-Phenol

Enzymatic activity of Lipoxygenase-3 (Soybean) Complex with 4-Hydroperoxy-2-Methoxy-Phenol

All present enzymatic activity of Lipoxygenase-3 (Soybean) Complex with 4-Hydroperoxy-2-Methoxy-Phenol:
1.13.11.12;

Protein crystallography data

The structure of Lipoxygenase-3 (Soybean) Complex with 4-Hydroperoxy-2-Methoxy-Phenol, PDB code: 1hu9 was solved by K.Zhou, E.Skrzypczak-Jankun, N.P.Mccabe, S.H.Selman, J.Jankun, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.20
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 112.790, 137.320, 61.870, 90.00, 95.55, 90.00
R / Rfree (%) 18.5 / 27.1

Iron Binding Sites:

The binding sites of Iron atom in the Lipoxygenase-3 (Soybean) Complex with 4-Hydroperoxy-2-Methoxy-Phenol (pdb code 1hu9). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Lipoxygenase-3 (Soybean) Complex with 4-Hydroperoxy-2-Methoxy-Phenol, PDB code: 1hu9:

Iron binding site 1 out of 1 in 1hu9

Go back to Iron Binding Sites List in 1hu9
Iron binding site 1 out of 1 in the Lipoxygenase-3 (Soybean) Complex with 4-Hydroperoxy-2-Methoxy-Phenol


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Lipoxygenase-3 (Soybean) Complex with 4-Hydroperoxy-2-Methoxy-Phenol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe858

b:30.5
occ:1.00
O8 A:4HM861 2.0 42.3 1.0
OXT A:ILE857 2.1 29.9 1.0
NE2 A:HIS523 2.2 22.2 1.0
NE2 A:HIS518 2.2 28.8 1.0
NE2 A:HIS709 2.2 22.4 1.0
OD1 A:ASN713 2.2 34.8 1.0
C A:ILE857 3.0 28.3 1.0
CE1 A:HIS518 3.1 26.3 1.0
O7 A:4HM861 3.1 53.3 1.0
CE1 A:HIS709 3.1 20.0 1.0
CE1 A:HIS523 3.2 17.9 1.0
O A:ILE857 3.2 30.5 1.0
CD2 A:HIS523 3.3 8.8 1.0
CD2 A:HIS709 3.4 21.0 1.0
CG A:ASN713 3.4 21.5 1.0
CD2 A:HIS518 3.4 28.1 1.0
C4 A:4HM861 4.0 59.5 1.0
CB A:ASN713 4.1 12.4 1.0
ND1 A:HIS518 4.3 28.1 1.0
ND1 A:HIS709 4.3 17.7 1.0
ND1 A:HIS523 4.3 10.3 1.0
ND2 A:ASN713 4.4 21.4 1.0
CA A:ILE857 4.4 21.1 1.0
CG A:HIS523 4.4 10.4 1.0
CG A:HIS518 4.5 24.0 1.0
CG A:HIS709 4.5 21.0 1.0
CG2 A:ILE855 4.5 15.4 1.0
C5 A:4HM861 4.6 62.4 1.0
N A:ILE857 4.8 24.5 1.0
C3 A:4HM861 4.9 64.4 1.0

Reference:

E.Skrzypczak-Jankun, K.Zhou, N.P.Mccabe, S.H.Selman, J.Jankun. Structure of Curcumin in Complex with Lipoxygenase and Its Significance in Cancer. Int.J.Mol.Med. V. 12 17 2003.
ISSN: ISSN 1107-3756
PubMed: 12792803
Page generated: Sun Dec 13 14:18:04 2020

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