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Iron in PDB 1isb: Structure-Function in E. Coli Iron Superoxide Dismutase: Comparisons with the Manganese Enzyme From T. Thermophilus

Enzymatic activity of Structure-Function in E. Coli Iron Superoxide Dismutase: Comparisons with the Manganese Enzyme From T. Thermophilus

All present enzymatic activity of Structure-Function in E. Coli Iron Superoxide Dismutase: Comparisons with the Manganese Enzyme From T. Thermophilus:
1.15.1.1;

Protein crystallography data

The structure of Structure-Function in E. Coli Iron Superoxide Dismutase: Comparisons with the Manganese Enzyme From T. Thermophilus, PDB code: 1isb was solved by M.S.Lah, M.Dixon, K.A.Pattridge, W.C.Stallings, J.A.Fee, M.L.Ludwig, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 81.620, 75.280, 71.610, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Structure-Function in E. Coli Iron Superoxide Dismutase: Comparisons with the Manganese Enzyme From T. Thermophilus (pdb code 1isb). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure-Function in E. Coli Iron Superoxide Dismutase: Comparisons with the Manganese Enzyme From T. Thermophilus, PDB code: 1isb:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1isb

Go back to Iron Binding Sites List in 1isb
Iron binding site 1 out of 2 in the Structure-Function in E. Coli Iron Superoxide Dismutase: Comparisons with the Manganese Enzyme From T. Thermophilus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure-Function in E. Coli Iron Superoxide Dismutase: Comparisons with the Manganese Enzyme From T. Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe193

b:5.2
occ:1.00
OD2 A:ASP156 1.9 4.7 1.0
O A:HOH194 1.9 3.8 1.0
NE2 A:HIS73 2.1 5.5 1.0
NE2 A:HIS160 2.1 4.8 1.0
NE2 A:HIS26 2.2 4.2 1.0
CG A:ASP156 3.0 3.9 1.0
CD2 A:HIS160 3.0 4.0 1.0
CD2 A:HIS73 3.0 4.8 1.0
CE1 A:HIS73 3.0 5.8 1.0
CE1 A:HIS160 3.1 4.4 1.0
CD2 A:HIS26 3.1 3.3 1.0
CE1 A:HIS26 3.1 3.2 1.0
OD1 A:ASP156 3.4 3.8 1.0
ND1 A:HIS73 4.1 3.0 1.0
CG A:HIS73 4.1 3.1 1.0
ND1 A:HIS160 4.2 4.5 1.0
CG A:HIS160 4.2 4.9 1.0
ND1 A:HIS26 4.2 4.8 1.0
CG A:HIS26 4.2 3.9 1.0
CB A:ASP156 4.3 2.4 1.0
CH2 A:TRP122 4.4 2.1 1.0
CZ2 A:TRP122 4.5 3.6 1.0
CB A:TRP158 4.6 2.0 1.0
CG A:TRP158 4.8 4.0 1.0

Iron binding site 2 out of 2 in 1isb

Go back to Iron Binding Sites List in 1isb
Iron binding site 2 out of 2 in the Structure-Function in E. Coli Iron Superoxide Dismutase: Comparisons with the Manganese Enzyme From T. Thermophilus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure-Function in E. Coli Iron Superoxide Dismutase: Comparisons with the Manganese Enzyme From T. Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe193

b:5.7
occ:1.00
OD2 B:ASP156 1.9 5.9 1.0
O B:HOH194 2.0 8.9 1.0
NE2 B:HIS73 2.0 4.5 1.0
NE2 B:HIS160 2.1 4.6 1.0
NE2 B:HIS26 2.2 6.4 1.0
CD2 B:HIS73 2.9 3.4 1.0
CG B:ASP156 3.0 4.7 1.0
CD2 B:HIS160 3.0 2.0 1.0
CE1 B:HIS160 3.0 4.5 1.0
CE1 B:HIS73 3.0 3.8 1.0
CE1 B:HIS26 3.1 2.6 1.0
CD2 B:HIS26 3.1 2.3 1.0
OD1 B:ASP156 3.4 4.1 1.0
CG B:HIS73 4.1 4.0 1.0
ND1 B:HIS73 4.1 3.3 1.0
ND1 B:HIS160 4.2 3.2 1.0
CG B:HIS160 4.2 2.6 1.0
ND1 B:HIS26 4.2 2.7 1.0
CG B:HIS26 4.2 3.9 1.0
CB B:ASP156 4.3 3.4 1.0
CH2 B:TRP122 4.4 5.5 1.0
CZ2 B:TRP122 4.5 4.9 1.0
CB B:TRP158 4.5 2.5 1.0
CG B:TRP158 4.7 4.1 1.0
NE2 B:GLN69 5.0 5.2 1.0

Reference:

M.S.Lah, M.M.Dixon, K.A.Pattridge, W.C.Stallings, J.A.Fee, M.L.Ludwig. Structure-Function in Escherichia Coli Iron Superoxide Dismutase: Comparisons with the Manganese Enzyme From Thermus Thermophilus. Biochemistry V. 34 1646 1995.
ISSN: ISSN 0006-2960
PubMed: 7849024
DOI: 10.1021/BI00005A021
Page generated: Sat Aug 3 08:12:39 2024

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