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Iron in PDB 1k1k: Structure of Mutant Human Carbonmonoxyhemoglobin C (Beta E6K) at 2.0 Angstrom Resolution in Phosphate Buffer.

Protein crystallography data

The structure of Structure of Mutant Human Carbonmonoxyhemoglobin C (Beta E6K) at 2.0 Angstrom Resolution in Phosphate Buffer., PDB code: 1k1k was solved by J.C.Dewan, A.Taylor-Feeling, Y.A.Puius, L.Patskovska, Y.Patskovsky, R.L.Nagel, S.C.Almo, R.E.Hirsch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.55 / 2.00
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 54.160, 54.160, 195.300, 90.00, 90.00, 90.00
R / Rfree (%) 18.3 / 23.8

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Mutant Human Carbonmonoxyhemoglobin C (Beta E6K) at 2.0 Angstrom Resolution in Phosphate Buffer. (pdb code 1k1k). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of Mutant Human Carbonmonoxyhemoglobin C (Beta E6K) at 2.0 Angstrom Resolution in Phosphate Buffer., PDB code: 1k1k:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1k1k

Go back to Iron Binding Sites List in 1k1k
Iron binding site 1 out of 2 in the Structure of Mutant Human Carbonmonoxyhemoglobin C (Beta E6K) at 2.0 Angstrom Resolution in Phosphate Buffer.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Mutant Human Carbonmonoxyhemoglobin C (Beta E6K) at 2.0 Angstrom Resolution in Phosphate Buffer. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe142

b:15.3
occ:1.00
FE A:HEM142 0.0 15.3 1.0
C A:CMO143 1.8 16.1 1.0
NA A:HEM142 1.9 15.0 1.0
ND A:HEM142 1.9 16.1 1.0
NC A:HEM142 2.0 14.6 1.0
NB A:HEM142 2.0 14.8 1.0
NE2 A:HIS87 2.2 12.5 1.0
O A:CMO143 2.9 22.0 1.0
C1A A:HEM142 3.0 16.4 1.0
C4D A:HEM142 3.0 15.6 1.0
C1D A:HEM142 3.0 13.3 1.0
C4A A:HEM142 3.0 15.7 1.0
C1C A:HEM142 3.0 18.4 1.0
C4C A:HEM142 3.0 13.5 1.0
C4B A:HEM142 3.0 16.3 1.0
C1B A:HEM142 3.1 13.2 1.0
CE1 A:HIS87 3.1 9.5 1.0
CD2 A:HIS87 3.2 12.6 1.0
CHA A:HEM142 3.3 14.8 1.0
CHD A:HEM142 3.4 10.5 1.0
CHC A:HEM142 3.4 15.2 1.0
CHB A:HEM142 3.4 12.4 1.0
C2A A:HEM142 4.2 18.5 1.0
C3D A:HEM142 4.2 18.4 1.0
C2D A:HEM142 4.2 16.4 1.0
C3A A:HEM142 4.2 17.1 1.0
C3C A:HEM142 4.2 14.5 1.0
C2C A:HEM142 4.3 13.9 1.0
C3B A:HEM142 4.3 11.7 1.0
CG A:HIS87 4.3 12.1 1.0
ND1 A:HIS87 4.3 14.8 1.0
C2B A:HEM142 4.3 16.1 1.0
NE2 A:HIS58 4.4 12.3 1.0

Iron binding site 2 out of 2 in 1k1k

Go back to Iron Binding Sites List in 1k1k
Iron binding site 2 out of 2 in the Structure of Mutant Human Carbonmonoxyhemoglobin C (Beta E6K) at 2.0 Angstrom Resolution in Phosphate Buffer.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Mutant Human Carbonmonoxyhemoglobin C (Beta E6K) at 2.0 Angstrom Resolution in Phosphate Buffer. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe147

b:19.3
occ:1.00
FE B:HEM147 0.0 19.3 1.0
C B:CMO148 1.8 23.5 1.0
NB B:HEM147 2.0 16.3 1.0
NA B:HEM147 2.0 18.2 1.0
ND B:HEM147 2.0 21.0 1.0
NC B:HEM147 2.0 20.5 1.0
NE2 B:HIS92 2.1 15.8 1.0
O B:CMO148 2.9 32.0 1.0
CE1 B:HIS92 3.0 20.7 1.0
C1A B:HEM147 3.0 17.8 1.0
C4B B:HEM147 3.0 16.7 1.0
C4D B:HEM147 3.0 22.1 1.0
C1B B:HEM147 3.0 14.7 1.0
C4A B:HEM147 3.0 20.0 1.0
C1D B:HEM147 3.0 21.4 1.0
CD2 B:HIS92 3.1 18.8 1.0
C1C B:HEM147 3.1 16.2 1.0
C4C B:HEM147 3.1 18.1 1.0
CHA B:HEM147 3.4 16.7 1.0
CHB B:HEM147 3.4 15.5 1.0
CHC B:HEM147 3.4 11.8 1.0
CHD B:HEM147 3.4 16.6 1.0
CG B:HIS92 4.2 17.0 1.0
ND1 B:HIS92 4.2 21.7 1.0
C3D B:HEM147 4.2 22.1 1.0
C3B B:HEM147 4.2 15.6 1.0
C2B B:HEM147 4.2 15.0 1.0
C2A B:HEM147 4.3 20.9 1.0
C2D B:HEM147 4.3 24.1 1.0
C3A B:HEM147 4.3 19.1 1.0
C2C B:HEM147 4.4 18.0 1.0
C3C B:HEM147 4.4 19.4 1.0
NE2 B:HIS63 4.6 30.1 1.0
CG2 B:VAL67 4.8 19.6 1.0

Reference:

J.C.Dewan, A.Feeling-Taylor, Y.A.Puius, L.Patskovska, Y.Patskovsky, R.L.Nagel, S.C.Almo, R.E.Hirsch. Structure of Mutant Human Carbonmonoxyhemoglobin C (BETAE6K) at 2.0 A Resolution. Acta Crystallogr.,Sect.D V. 58 2038 2002.
ISSN: ISSN 0907-4449
PubMed: 12454462
DOI: 10.1107/S0907444902016426
Page generated: Sat Aug 3 08:53:43 2024

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