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Iron in PDB 1kbi: Crystallographic Study of the Recombinant Flavin-Binding Domain of Baker'S Yeast Flavocytochrome B2: Comparison with the Intact Wild- Type Enzyme

Enzymatic activity of Crystallographic Study of the Recombinant Flavin-Binding Domain of Baker'S Yeast Flavocytochrome B2: Comparison with the Intact Wild- Type Enzyme

All present enzymatic activity of Crystallographic Study of the Recombinant Flavin-Binding Domain of Baker'S Yeast Flavocytochrome B2: Comparison with the Intact Wild- Type Enzyme:
1.1.2.3;

Protein crystallography data

The structure of Crystallographic Study of the Recombinant Flavin-Binding Domain of Baker'S Yeast Flavocytochrome B2: Comparison with the Intact Wild- Type Enzyme, PDB code: 1kbi was solved by L.M.Cunane, J.D.Barton, Z.-W.Chen, F.E.Welsh, S.K.Chapman, G.A.Reid, F.S.Mathews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.30
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 164.160, 164.160, 111.600, 90.00, 90.00, 120.00
R / Rfree (%) 17 / 21.1

Iron Binding Sites:

The binding sites of Iron atom in the Crystallographic Study of the Recombinant Flavin-Binding Domain of Baker'S Yeast Flavocytochrome B2: Comparison with the Intact Wild- Type Enzyme (pdb code 1kbi). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystallographic Study of the Recombinant Flavin-Binding Domain of Baker'S Yeast Flavocytochrome B2: Comparison with the Intact Wild- Type Enzyme, PDB code: 1kbi:

Iron binding site 1 out of 1 in 1kbi

Go back to Iron Binding Sites List in 1kbi
Iron binding site 1 out of 1 in the Crystallographic Study of the Recombinant Flavin-Binding Domain of Baker'S Yeast Flavocytochrome B2: Comparison with the Intact Wild- Type Enzyme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystallographic Study of the Recombinant Flavin-Binding Domain of Baker'S Yeast Flavocytochrome B2: Comparison with the Intact Wild- Type Enzyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe760

b:28.6
occ:1.00
 FE A:HEM760 0.0 28.6 1.0
ND A:HEM760 2.0 27.5 1.0
NB A:HEM760 2.0 29.1 1.0
NC A:HEM760 2.0 31.0 1.0
NE2 A:HIS66 2.0 22.5 1.0
NA A:HEM760 2.0 28.0 1.0
NE2 A:HIS43 2.1 25.8 1.0
CE1 A:HIS66 3.0 26.1 1.0
C4B A:HEM760 3.0 27.9 1.0
CE1 A:HIS43 3.0 27.1 1.0
CD2 A:HIS66 3.1 28.8 1.0
C1C A:HEM760 3.1 30.9 1.0
C1D A:HEM760 3.1 28.8 1.0
C4D A:HEM760 3.1 28.7 1.0
C1B A:HEM760 3.1 30.1 1.0
C4A A:HEM760 3.1 30.7 1.0
CD2 A:HIS43 3.1 25.2 1.0
C4C A:HEM760 3.1 30.6 1.0
C1A A:HEM760 3.1 24.6 1.0
CHC A:HEM760 3.4 28.7 1.0
CHD A:HEM760 3.5 29.4 1.0
CHB A:HEM760 3.5 28.9 1.0
CHA A:HEM760 3.5 25.5 1.0
ND1 A:HIS66 4.1 29.3 1.0
ND1 A:HIS43 4.2 25.1 1.0
CG A:HIS66 4.2 26.6 1.0
CG A:HIS43 4.2 25.1 1.0
C3D A:HEM760 4.3 30.2 1.0
C3B A:HEM760 4.3 29.1 1.0
C2D A:HEM760 4.3 30.1 1.0
C2C A:HEM760 4.3 31.6 1.0
C2B A:HEM760 4.3 27.3 1.0
C2A A:HEM760 4.4 28.9 1.0
C3A A:HEM760 4.4 29.3 1.0
C3C A:HEM760 4.4 31.2 1.0
N A:GLY45 4.9 27.5 1.0
CD1 A:PHE62 5.0 29.2 1.0

Reference:

L.M.Cunane, J.D.Barton, Z.W.Chen, F.E.Welsh, S.K.Chapman, G.A.Reid, F.S.Mathews. Crystallographic Study of the Recombinant Flavin-Binding Domain of Baker'S Yeast Flavocytochrome B(2): Comparison with the Intact Wild-Type Enzyme. Biochemistry V. 41 4264 2002.
ISSN: ISSN 0006-2960
PubMed: 11914072
DOI: 10.1021/BI0119870
Page generated: Sun Dec 13 14:20:51 2020

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