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Iron in PDB 1mni: Alteration of Axial Coordination By Protein Engineering in Myoglobin. Bis-Imidazole Ligation in the HIS64-- >Val(Slash)VAL68-->His Double Mutant

Protein crystallography data

The structure of Alteration of Axial Coordination By Protein Engineering in Myoglobin. Bis-Imidazole Ligation in the HIS64-- >Val(Slash)VAL68-->His Double Mutant, PDB code: 1mni was solved by S.Krzywda, A.J.Wilkinson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.07
Space group I 21
Cell size a, b, c (Å), α, β, γ (°) 124.490, 42.280, 92.270, 90.00, 92.62, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Alteration of Axial Coordination By Protein Engineering in Myoglobin. Bis-Imidazole Ligation in the HIS64-- >Val(Slash)VAL68-->His Double Mutant (pdb code 1mni). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Alteration of Axial Coordination By Protein Engineering in Myoglobin. Bis-Imidazole Ligation in the HIS64-- >Val(Slash)VAL68-->His Double Mutant, PDB code: 1mni:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1mni

Go back to Iron Binding Sites List in 1mni
Iron binding site 1 out of 2 in the Alteration of Axial Coordination By Protein Engineering in Myoglobin. Bis-Imidazole Ligation in the HIS64-- >Val(Slash)VAL68-->His Double Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Alteration of Axial Coordination By Protein Engineering in Myoglobin. Bis-Imidazole Ligation in the HIS64-- >Val(Slash)VAL68-->His Double Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe154

b:21.0
occ:1.00
FE A:HEM154 0.0 21.0 1.0
NC A:HEM154 2.0 20.1 1.0
ND A:HEM154 2.0 20.5 1.0
NA A:HEM154 2.0 19.2 1.0
NB A:HEM154 2.0 19.7 1.0
NE2 A:HIS93 2.3 25.2 1.0
NE2 A:HIS68 2.3 20.6 1.0
C1D A:HEM154 3.0 20.2 1.0
C4C A:HEM154 3.0 20.3 1.0
C1A A:HEM154 3.0 19.4 1.0
C4D A:HEM154 3.0 20.6 1.0
C4A A:HEM154 3.0 18.7 1.0
C4B A:HEM154 3.0 19.6 1.0
CD2 A:HIS68 3.0 18.2 1.0
CE1 A:HIS93 3.1 28.7 1.0
C1C A:HEM154 3.1 19.5 1.0
C1B A:HEM154 3.1 19.0 1.0
CE1 A:HIS68 3.3 21.6 1.0
CD2 A:HIS93 3.3 26.6 1.0
CHD A:HEM154 3.4 20.0 1.0
CHC A:HEM154 3.4 19.7 1.0
CHA A:HEM154 3.4 19.9 1.0
CHB A:HEM154 3.5 18.7 1.0
CG A:HIS68 4.2 18.0 1.0
C3D A:HEM154 4.2 21.9 1.0
C2A A:HEM154 4.2 19.5 1.0
C3A A:HEM154 4.2 18.7 1.0
ND1 A:HIS93 4.2 25.3 1.0
C2D A:HEM154 4.2 21.3 1.0
C3C A:HEM154 4.2 19.7 1.0
ND1 A:HIS68 4.2 20.6 1.0
C2C A:HEM154 4.3 19.4 1.0
C3B A:HEM154 4.3 19.8 1.0
C2B A:HEM154 4.3 19.9 1.0
CG A:HIS93 4.4 24.4 1.0

Iron binding site 2 out of 2 in 1mni

Go back to Iron Binding Sites List in 1mni
Iron binding site 2 out of 2 in the Alteration of Axial Coordination By Protein Engineering in Myoglobin. Bis-Imidazole Ligation in the HIS64-- >Val(Slash)VAL68-->His Double Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Alteration of Axial Coordination By Protein Engineering in Myoglobin. Bis-Imidazole Ligation in the HIS64-- >Val(Slash)VAL68-->His Double Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe154

b:18.6
occ:1.00
FE B:HEM154 0.0 18.6 1.0
NC B:HEM154 1.9 16.3 1.0
NA B:HEM154 2.0 18.1 1.0
NB B:HEM154 2.0 17.7 1.0
ND B:HEM154 2.0 17.7 1.0
NE2 B:HIS93 2.1 19.4 1.0
NE2 B:HIS68 2.3 18.6 1.0
C4C B:HEM154 3.0 16.8 1.0
C1C B:HEM154 3.0 17.2 1.0
C4A B:HEM154 3.0 18.8 1.0
CD2 B:HIS93 3.0 17.2 1.0
CD2 B:HIS68 3.0 18.1 1.0
C1A B:HEM154 3.0 18.9 1.0
C4B B:HEM154 3.0 18.0 1.0
C4D B:HEM154 3.0 18.3 1.0
C1D B:HEM154 3.0 17.5 1.0
C1B B:HEM154 3.1 17.4 1.0
CE1 B:HIS93 3.2 20.8 1.0
CE1 B:HIS68 3.3 17.2 1.0
CHC B:HEM154 3.4 17.3 1.0
CHA B:HEM154 3.5 18.2 1.0
CHB B:HEM154 3.5 18.5 1.0
CHD B:HEM154 3.5 16.5 1.0
CG B:HIS68 4.1 19.6 1.0
C3C B:HEM154 4.2 17.4 1.0
CG B:HIS93 4.2 17.9 1.0
C2C B:HEM154 4.2 17.2 1.0
ND1 B:HIS93 4.2 20.4 1.0
C2A B:HEM154 4.2 19.3 1.0
ND1 B:HIS68 4.2 17.3 1.0
C3A B:HEM154 4.2 18.4 1.0
C3D B:HEM154 4.3 19.5 1.0
C3B B:HEM154 4.3 18.1 1.0
C2B B:HEM154 4.3 18.2 1.0
C2D B:HEM154 4.3 18.9 1.0

Reference:

Y.Dou, S.J.Admiraal, M.Ikeda-Saito, S.Krzywda, A.J.Wilkinson, T.Li, J.S.Olson, R.C.Prince, I.J.Pickering, G.N.George. Alteration of Axial Coordination By Protein Engineering in Myoglobin. Bisimidazole Ligation in the HIS64-->Val/VAL68-->His Double Mutant. J.Biol.Chem. V. 270 15993 1995.
ISSN: ISSN 0021-9258
PubMed: 7608158
DOI: 10.1074/JBC.270.27.15993
Page generated: Sat Aug 3 11:03:09 2024

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