Atomistry » Iron » PDB 1mkq-1mpw » 1mno
Atomistry »
  Iron »
    PDB 1mkq-1mpw »
      1mno »

Iron in PDB 1mno: V68N Myoglobin Oxy Form

Protein crystallography data

The structure of V68N Myoglobin Oxy Form, PDB code: 1mno was solved by G.N.Murshudov, S.Krzywda, A.M.Brzozowski, M.Jaskolski, E.E.Scott, S.A.Klizas, Q.H.Gibson, J.S.Olson, A.J.Wilkinson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.00 / 1.95
Space group I 21
Cell size a, b, c (Å), α, β, γ (°) 122.180, 42.120, 91.560, 90.00, 92.62, 90.00
R / Rfree (%) 19.1 / 25

Iron Binding Sites:

The binding sites of Iron atom in the V68N Myoglobin Oxy Form (pdb code 1mno). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the V68N Myoglobin Oxy Form, PDB code: 1mno:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1mno

Go back to Iron Binding Sites List in 1mno
Iron binding site 1 out of 2 in the V68N Myoglobin Oxy Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of V68N Myoglobin Oxy Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe154

b:23.8
occ:1.00
FE A:HEM154 0.0 23.8 1.0
O1 A:OXY155 1.8 33.8 1.0
NC A:HEM154 2.0 21.2 1.0
NA A:HEM154 2.0 18.9 1.0
NB A:HEM154 2.0 20.6 1.0
ND A:HEM154 2.0 22.0 1.0
NE2 A:HIS93 2.2 24.1 1.0
O2 A:OXY155 2.7 46.3 1.0
C4C A:HEM154 3.0 24.4 1.0
C4B A:HEM154 3.0 16.0 1.0
C1C A:HEM154 3.0 21.9 1.0
C1B A:HEM154 3.0 17.6 1.0
C1D A:HEM154 3.0 26.2 1.0
C4A A:HEM154 3.1 21.5 1.0
C1A A:HEM154 3.1 20.0 1.0
C4D A:HEM154 3.1 23.0 1.0
CD2 A:HIS93 3.1 23.9 1.0
CE1 A:HIS93 3.2 19.6 1.0
CHD A:HEM154 3.4 24.8 1.0
CHB A:HEM154 3.4 18.4 1.0
CHC A:HEM154 3.5 16.4 1.0
CHA A:HEM154 3.5 21.8 1.0
C3C A:HEM154 4.2 26.2 1.0
C2C A:HEM154 4.2 24.2 1.0
ND1 A:HIS93 4.2 25.8 1.0
CG A:HIS93 4.3 26.8 1.0
C2B A:HEM154 4.3 16.7 1.0
C3B A:HEM154 4.3 18.6 1.0
C2A A:HEM154 4.3 19.4 1.0
NE2 A:HIS64 4.3 26.8 1.0
C3A A:HEM154 4.3 21.9 1.0
C3D A:HEM154 4.3 24.7 1.0
C2D A:HEM154 4.3 26.7 1.0
ND2 A:ASN68 4.4 25.4 1.0
CE1 A:HIS64 4.6 27.8 1.0

Iron binding site 2 out of 2 in 1mno

Go back to Iron Binding Sites List in 1mno
Iron binding site 2 out of 2 in the V68N Myoglobin Oxy Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of V68N Myoglobin Oxy Form within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe154

b:22.5
occ:1.00
FE B:HEM154 0.0 22.5 1.0
O1 B:OXY155 1.9 40.0 1.0
NA B:HEM154 1.9 17.5 1.0
NC B:HEM154 2.0 16.5 1.0
ND B:HEM154 2.1 19.6 1.0
NB B:HEM154 2.1 17.7 1.0
NE2 B:HIS93 2.2 22.9 1.0
O2 B:OXY155 2.8 47.3 1.0
C4A B:HEM154 3.0 19.9 1.0
C1A B:HEM154 3.0 22.5 1.0
C4D B:HEM154 3.0 19.0 1.0
C1B B:HEM154 3.0 17.4 1.0
C1D B:HEM154 3.0 21.9 1.0
C4C B:HEM154 3.0 19.1 1.0
C4B B:HEM154 3.0 14.9 1.0
CE1 B:HIS93 3.1 23.8 1.0
C1C B:HEM154 3.1 19.3 1.0
CD2 B:HIS93 3.2 20.6 1.0
CHB B:HEM154 3.4 16.1 1.0
CHA B:HEM154 3.4 17.2 1.0
CHD B:HEM154 3.4 19.0 1.0
CHC B:HEM154 3.5 18.7 1.0
C2A B:HEM154 4.2 16.8 1.0
C3A B:HEM154 4.2 19.4 1.0
ND1 B:HIS93 4.2 26.0 1.0
C3C B:HEM154 4.3 22.3 1.0
C2C B:HEM154 4.3 23.6 1.0
C3D B:HEM154 4.3 22.4 1.0
C2B B:HEM154 4.3 14.2 1.0
C3B B:HEM154 4.3 17.6 1.0
C2D B:HEM154 4.3 25.9 1.0
CG B:HIS93 4.3 25.2 1.0
NE2 B:HIS64 4.4 26.9 1.0
ND2 B:ASN68 4.5 24.0 1.0
CE1 B:HIS64 4.6 28.1 1.0

Reference:

S.Krzywda, G.N.Murshudov, A.M.Brzozowski, M.Jaskolski, E.E.Scott, S.A.Klizas, Q.H.Gibson, J.S.Olson, A.J.Wilkinson. Stabilizing Bound O2 in Myoglobin By VALINE68 (E11) to Asparagine Substitution. Biochemistry V. 37 15896 1998.
ISSN: ISSN 0006-2960
PubMed: 9843395
DOI: 10.1021/BI9812470
Page generated: Sat Aug 3 11:04:01 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy