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Iron in PDB 1mqv: Crystal Structure of the Q1A/F32W/W72F Mutant of Rhodopseudomonas Palustris Cytochrome C' (Prime) Expressed in E. Coli

Protein crystallography data

The structure of Crystal Structure of the Q1A/F32W/W72F Mutant of Rhodopseudomonas Palustris Cytochrome C' (Prime) Expressed in E. Coli, PDB code: 1mqv was solved by J.C.Lee, K.C.Engman, F.A.Tezcan, H.B.Gray, J.R.Winkler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.00 / 1.78
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 33.839, 62.085, 113.419, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 26.5

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the Q1A/F32W/W72F Mutant of Rhodopseudomonas Palustris Cytochrome C' (Prime) Expressed in E. Coli (pdb code 1mqv). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of the Q1A/F32W/W72F Mutant of Rhodopseudomonas Palustris Cytochrome C' (Prime) Expressed in E. Coli, PDB code: 1mqv:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1mqv

Go back to Iron Binding Sites List in 1mqv
Iron binding site 1 out of 2 in the Crystal Structure of the Q1A/F32W/W72F Mutant of Rhodopseudomonas Palustris Cytochrome C' (Prime) Expressed in E. Coli


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Q1A/F32W/W72F Mutant of Rhodopseudomonas Palustris Cytochrome C' (Prime) Expressed in E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe150

b:23.0
occ:1.00
FE A:HEM150 0.0 23.0 1.0
NB A:HEM150 1.9 19.6 1.0
NC A:HEM150 2.0 24.4 1.0
ND A:HEM150 2.0 21.4 1.0
NA A:HEM150 2.1 20.8 1.0
NE2 A:HIS117 2.1 18.5 1.0
C4B A:HEM150 3.0 18.9 1.0
C4D A:HEM150 3.0 32.0 1.0
C1B A:HEM150 3.0 23.2 1.0
C1A A:HEM150 3.0 24.9 1.0
C1C A:HEM150 3.1 22.0 1.0
CE1 A:HIS117 3.1 26.1 1.0
C4A A:HEM150 3.1 18.3 1.0
C4C A:HEM150 3.1 18.5 1.0
C1D A:HEM150 3.1 17.9 1.0
CD2 A:HIS117 3.1 19.0 1.0
CHA A:HEM150 3.4 30.8 1.0
CHC A:HEM150 3.4 25.4 1.0
CHB A:HEM150 3.4 25.4 1.0
CD2 A:LEU12 3.5 20.3 1.0
CHD A:HEM150 3.5 19.8 1.0
ND1 A:HIS117 4.2 24.0 1.0
NH1 A:ARG121 4.2 28.7 1.0
C2A A:HEM150 4.3 19.1 1.0
CG A:HIS117 4.3 23.7 1.0
C3B A:HEM150 4.3 21.3 1.0
C2C A:HEM150 4.3 22.3 1.0
C3D A:HEM150 4.3 15.9 1.0
C2B A:HEM150 4.3 28.2 1.0
C3A A:HEM150 4.3 21.1 1.0
C2D A:HEM150 4.4 25.1 1.0
C3C A:HEM150 4.4 22.4 1.0
CG A:LEU12 4.5 23.5 1.0
CB A:LEU12 4.7 21.5 1.0
CD1 A:LEU12 4.7 28.8 1.0

Iron binding site 2 out of 2 in 1mqv

Go back to Iron Binding Sites List in 1mqv
Iron binding site 2 out of 2 in the Crystal Structure of the Q1A/F32W/W72F Mutant of Rhodopseudomonas Palustris Cytochrome C' (Prime) Expressed in E. Coli


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of the Q1A/F32W/W72F Mutant of Rhodopseudomonas Palustris Cytochrome C' (Prime) Expressed in E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe150

b:30.1
occ:1.00
FE B:HEM150 0.0 30.1 1.0
NA B:HEM150 1.9 28.5 1.0
NC B:HEM150 2.0 24.6 1.0
NB B:HEM150 2.0 30.7 1.0
NE2 B:HIS117 2.1 26.1 1.0
ND B:HEM150 2.1 29.0 1.0
C1C B:HEM150 3.0 26.5 1.0
C4B B:HEM150 3.0 36.2 1.0
CE1 B:HIS117 3.0 48.7 1.0
C1A B:HEM150 3.0 35.4 1.0
C4A B:HEM150 3.1 23.4 1.0
C4D B:HEM150 3.1 35.6 1.0
C1D B:HEM150 3.1 24.9 1.0
CD2 B:HIS117 3.1 28.8 1.0
C4C B:HEM150 3.1 24.2 1.0
C1B B:HEM150 3.1 30.6 1.0
CHC B:HEM150 3.3 27.2 1.0
CHA B:HEM150 3.4 33.6 1.0
CHB B:HEM150 3.5 27.5 1.0
CD2 B:LEU12 3.5 22.7 1.0
CHD B:HEM150 3.5 24.9 1.0
ND1 B:HIS117 4.1 33.1 1.0
C2C B:HEM150 4.2 19.2 1.0
CG B:HIS117 4.2 37.8 1.0
C2A B:HEM150 4.3 28.7 1.0
C3A B:HEM150 4.3 33.2 1.0
C3C B:HEM150 4.3 23.8 1.0
C3D B:HEM150 4.3 26.8 1.0
C3B B:HEM150 4.3 25.0 1.0
C2D B:HEM150 4.3 27.2 1.0
C2B B:HEM150 4.4 34.4 1.0
CG B:LEU12 4.6 27.8 1.0
CD1 B:LEU12 4.8 27.9 1.0
NH1 B:ARG121 4.8 45.1 1.0
CB B:LEU12 4.9 28.7 1.0

Reference:

J.C.Lee, K.C.Engman, F.A.Tezcan, H.B.Gray, J.R.Winkler. Structural Features of Cytochrome C' Folding Intermediates Revealed By Fluorescence Energy-Transfer Kinetics Proc.Natl.Acad.Sci.Usa V. 99 14778 2002.
ISSN: ISSN 0027-8424
PubMed: 12407175
DOI: 10.1073/PNAS.192574099
Page generated: Sat Aug 3 11:07:34 2024

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