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Iron in PDB 1myt: Crystal Structure to 1.74 Angstroms Resolution of Metmyoglobin From Yellowfin Tuna (Thunnus Albacares): An Example of A Myoglobin Lacking the D Helix

Protein crystallography data

The structure of Crystal Structure to 1.74 Angstroms Resolution of Metmyoglobin From Yellowfin Tuna (Thunnus Albacares): An Example of A Myoglobin Lacking the D Helix, PDB code: 1myt was solved by G.I.Birnbaum, S.V.Evans, M.Przybylska, D.R.Rose, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 6.00 / 1.74
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.497, 72.318, 52.221, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure to 1.74 Angstroms Resolution of Metmyoglobin From Yellowfin Tuna (Thunnus Albacares): An Example of A Myoglobin Lacking the D Helix (pdb code 1myt). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure to 1.74 Angstroms Resolution of Metmyoglobin From Yellowfin Tuna (Thunnus Albacares): An Example of A Myoglobin Lacking the D Helix, PDB code: 1myt:

Iron binding site 1 out of 1 in 1myt

Go back to Iron Binding Sites List in 1myt
Iron binding site 1 out of 1 in the Crystal Structure to 1.74 Angstroms Resolution of Metmyoglobin From Yellowfin Tuna (Thunnus Albacares): An Example of A Myoglobin Lacking the D Helix


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure to 1.74 Angstroms Resolution of Metmyoglobin From Yellowfin Tuna (Thunnus Albacares): An Example of A Myoglobin Lacking the D Helix within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe154

b:5.8
occ:1.00
FE A:HEM154 0.0 5.8 1.0
ND A:HEM154 2.0 12.9 1.0
NA A:HEM154 2.0 12.2 1.0
NB A:HEM154 2.0 11.8 1.0
NC A:HEM154 2.0 15.2 1.0
NE2 A:HIS93 2.2 13.1 1.0
O A:HOH196 2.2 13.8 1.0
C4D A:HEM154 3.0 12.2 1.0
C1A A:HEM154 3.0 10.6 1.0
C4A A:HEM154 3.0 13.4 1.0
C4B A:HEM154 3.1 12.1 1.0
C1B A:HEM154 3.1 12.1 1.0
C1D A:HEM154 3.1 12.9 1.0
C1C A:HEM154 3.1 11.4 1.0
C4C A:HEM154 3.1 13.9 1.0
CD2 A:HIS93 3.2 13.7 1.0
CE1 A:HIS93 3.2 16.9 1.0
CHC A:HEM154 3.4 11.2 1.0
CHA A:HEM154 3.4 11.5 1.0
CHB A:HEM154 3.4 14.1 1.0
CHD A:HEM154 3.5 13.0 1.0
C2A A:HEM154 4.2 14.2 1.0
C3A A:HEM154 4.3 13.8 1.0
C3D A:HEM154 4.3 14.8 1.0
C2D A:HEM154 4.3 13.5 1.0
CG A:HIS93 4.3 12.9 1.0
C2B A:HEM154 4.3 10.2 1.0
C3B A:HEM154 4.3 12.7 1.0
ND1 A:HIS93 4.3 15.6 1.0
C2C A:HEM154 4.3 13.6 1.0
C3C A:HEM154 4.3 15.4 1.0
NE2 A:HIS64 4.4 14.2 1.0
CG2 A:VAL68 4.8 14.4 1.0
CE1 A:HIS64 4.9 16.1 1.0

Reference:

G.I.Birnbaum, S.V.Evans, M.Przybylska, D.R.Rose. 1.70 A Resolution Structure of Myoglobin From Yellowfin Tuna. An Example of A Myoglobin Lacking the D Helix. Acta Crystallogr.,Sect.D V. 50 283 1994.
ISSN: ISSN 0907-4449
PubMed: 15299440
DOI: 10.1107/S0907444993014271
Page generated: Sun Dec 13 14:24:42 2020

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