Atomistry » Iron » PDB 1n5w-1nmi » 1n84
Atomistry »
  Iron »
    PDB 1n5w-1nmi »
      1n84 »

Iron in PDB 1n84: Human Serum Transferrin, N-Lobe

Protein crystallography data

The structure of Human Serum Transferrin, N-Lobe, PDB code: 1n84 was solved by T.E.Adams, A.B.Mason, Q.Y.He, P.J.Halbrooks, S.K.Briggs, V.C.Smith, R.T.Macgillivray, S.J.Everse, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 16.54 / 2.05
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.015, 57.883, 135.661, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 22.8

Iron Binding Sites:

The binding sites of Iron atom in the Human Serum Transferrin, N-Lobe (pdb code 1n84). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Human Serum Transferrin, N-Lobe, PDB code: 1n84:

Iron binding site 1 out of 1 in 1n84

Go back to Iron Binding Sites List in 1n84
Iron binding site 1 out of 1 in the Human Serum Transferrin, N-Lobe


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Human Serum Transferrin, N-Lobe within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe339

b:16.9
occ:1.00
OH A:TYR188 2.0 11.1 1.0
OH A:TYR95 2.1 14.5 1.0
NE2 A:HIS249 2.3 11.1 1.0
OD1 A:ASP63 2.4 16.7 1.0
O2 A:CO3338 2.4 3.1 0.3
O1 A:CO3338 2.4 3.1 0.7
O2 A:CO3338 2.6 14.4 0.7
C A:CO3338 2.9 10.0 0.7
C A:CO3338 3.0 4.4 0.3
O1 A:CO3338 3.0 5.8 0.3
CZ A:TYR95 3.0 15.5 1.0
CZ A:TYR188 3.1 14.7 1.0
CE1 A:HIS249 3.2 10.1 1.0
CD2 A:HIS249 3.2 8.7 1.0
CG A:ASP63 3.4 13.2 1.0
CE2 A:TYR95 3.5 14.1 1.0
CE1 A:TYR188 3.8 14.0 1.0
CB A:ASP63 3.9 13.5 1.0
O A:HOH483 4.0 11.5 1.0
CE2 A:TYR188 4.0 14.4 1.0
CE1 A:TYR95 4.1 15.6 1.0
O3 A:CO3338 4.2 3.1 0.3
O3 A:CO3338 4.2 6.5 0.7
NH2 A:ARG124 4.3 22.8 0.5
NZ A:LYS296 4.3 16.6 1.0
ND1 A:HIS249 4.4 12.5 1.0
CG A:HIS249 4.4 10.3 1.0
OD2 A:ASP63 4.4 15.0 1.0
CB A:SER125 4.6 14.4 1.0
CA A:ASP63 4.6 14.0 1.0
N A:ALA126 4.8 13.7 1.0
CD2 A:TYR95 4.8 15.3 1.0
CD A:LYS296 4.9 15.5 1.0
CE A:LYS296 5.0 14.5 1.0
NE A:ARG124 5.0 19.4 0.5

Reference:

T.E.Adams, A.B.Mason, Q.Y.He, P.J.Halbrooks, S.K.Briggs, V.C.Smith, R.T.Macgillivray, S.J.Everse. The Position of Arginine 124 Controls the Rate of Iron Release From the N-Lobe of Human Serum Transferrin. A Structural Study J.Biol.Chem. V. 278 6027 2003.
ISSN: ISSN 0021-9258
PubMed: 12458193
DOI: 10.1074/JBC.M210349200
Page generated: Sat Aug 3 11:26:04 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy