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Iron in PDB 1n9f: Structure of Earth-Grown Oxidized Myoglobin Mutant Yqr (ISS6A)

Protein crystallography data

The structure of Structure of Earth-Grown Oxidized Myoglobin Mutant Yqr (ISS6A), PDB code: 1n9f was solved by A.E.Miele, G.Sciara, L.Federici, B.Vallone, M.Brunori, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 1.80
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 90.542, 90.542, 45.243, 90.00, 90.00, 120.00
R / Rfree (%) 17.9 / 20.2

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Earth-Grown Oxidized Myoglobin Mutant Yqr (ISS6A) (pdb code 1n9f). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of Earth-Grown Oxidized Myoglobin Mutant Yqr (ISS6A), PDB code: 1n9f:

Iron binding site 1 out of 1 in 1n9f

Go back to Iron Binding Sites List in 1n9f
Iron binding site 1 out of 1 in the Structure of Earth-Grown Oxidized Myoglobin Mutant Yqr (ISS6A)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Earth-Grown Oxidized Myoglobin Mutant Yqr (ISS6A) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe200

b:13.9
occ:1.00
FE A:HEM200 0.0 13.9 1.0
NC A:HEM200 2.0 14.2 1.0
ND A:HEM200 2.0 14.3 1.0
NA A:HEM200 2.0 15.2 1.0
NB A:HEM200 2.0 13.8 1.0
NE2 A:HIS93 2.2 12.7 1.0
O A:OH500 2.4 20.6 1.0
C1D A:HEM200 3.0 14.8 1.0
C4C A:HEM200 3.0 13.6 1.0
C4D A:HEM200 3.0 14.5 1.0
C1C A:HEM200 3.0 13.3 1.0
C4A A:HEM200 3.0 13.3 1.0
C1A A:HEM200 3.1 14.9 1.0
C4B A:HEM200 3.1 13.3 1.0
C1B A:HEM200 3.1 13.6 1.0
CE1 A:HIS93 3.1 14.9 1.0
CD2 A:HIS93 3.2 12.8 1.0
CHD A:HEM200 3.4 13.0 1.0
CHC A:HEM200 3.4 13.2 1.0
CHA A:HEM200 3.4 14.2 1.0
CHB A:HEM200 3.5 16.2 1.0
C2D A:HEM200 4.2 14.5 1.0
ND1 A:HIS93 4.2 13.9 1.0
C3D A:HEM200 4.2 14.5 1.0
C2C A:HEM200 4.3 12.8 1.0
C3C A:HEM200 4.3 15.0 1.0
C3A A:HEM200 4.3 12.8 1.0
C2A A:HEM200 4.3 13.2 1.0
CG A:HIS93 4.3 14.4 1.0
C3B A:HEM200 4.3 12.1 1.0
C2B A:HEM200 4.3 16.1 1.0
CG2 A:VAL68 4.6 21.9 1.0
NE2 A:GLN64 4.9 29.0 1.0

Reference:

A.E.Miele, L.Federici, G.Sciara, F.Draghi, M.Brunori, B.Vallone. Analysis of the Effect of Microgravity on Protein Crystal Quality: the Case of A Myoglobin Triple Mutant. Acta Crystallogr.,Sect.D V. 59 982 2003.
ISSN: ISSN 0907-4449
PubMed: 12777759
DOI: 10.1107/S0907444903005924
Page generated: Sat Aug 3 11:27:23 2024

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