Atomistry » Iron » PDB 1n5w-1nmi » 1neh
Atomistry »
  Iron »
    PDB 1n5w-1nmi »
      1neh »

Iron in PDB 1neh: High Potential Iron-Sulfur Protein

Iron Binding Sites:

The binding sites of Iron atom in the High Potential Iron-Sulfur Protein (pdb code 1neh). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the High Potential Iron-Sulfur Protein, PDB code: 1neh:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in 1neh

Go back to Iron Binding Sites List in 1neh
Iron binding site 1 out of 4 in the High Potential Iron-Sulfur Protein


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of High Potential Iron-Sulfur Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe86

b:0.0
occ:1.00
FE1 A:SF486 0.0 0.0 1.0
SG A:CYS43 2.0 0.0 1.0
S3 A:SF486 2.1 0.0 1.0
S2 A:SF486 2.2 0.0 1.0
S4 A:SF486 2.2 0.0 1.0
FE2 A:SF486 2.5 0.0 1.0
FE4 A:SF486 2.5 0.0 1.0
FE3 A:SF486 2.5 0.0 1.0
HA A:CYS43 3.0 0.0 1.0
CB A:CYS43 3.1 0.0 1.0
HB3 A:CYS43 3.2 0.0 1.0
HG12 A:ILE71 3.4 0.0 1.0
CA A:CYS43 3.6 0.0 1.0
S1 A:SF486 3.6 0.0 1.0
HG23 A:ILE71 3.9 0.0 1.0
HB3 A:CYS77 4.0 0.0 1.0
HB2 A:CYS43 4.0 0.0 1.0
HB2 A:CYS46 4.1 0.0 1.0
H A:CYS77 4.1 0.0 1.0
HA A:TRP76 4.1 0.0 1.0
HB3 A:CYS46 4.1 0.0 1.0
SG A:CYS46 4.2 0.0 1.0
HB A:ILE71 4.3 0.0 1.0
N A:CYS43 4.3 0.0 1.0
SG A:CYS77 4.3 0.0 1.0
H A:CYS43 4.3 0.0 1.0
CB A:CYS46 4.4 0.0 1.0
SG A:CYS63 4.4 0.0 1.0
N A:CYS77 4.4 0.0 1.0
CG1 A:ILE71 4.4 0.0 1.0
HB2 A:CYS63 4.5 0.0 1.0
HD2 A:TYR19 4.6 0.0 1.0
CB A:CYS77 4.6 0.0 1.0
HD11 A:ILE71 4.7 0.0 1.0
HD12 A:ILE71 4.7 0.0 1.0
HD1 A:TRP80 4.8 0.0 1.0
CB A:ILE71 4.8 0.0 1.0
CG2 A:ILE71 4.8 0.0 1.0
C A:CYS43 4.8 0.0 1.0
C A:TRP76 4.8 0.0 1.0
CD1 A:ILE71 4.9 0.0 1.0
O A:PHE48 4.9 0.0 1.0
CA A:TRP76 4.9 0.0 1.0
HA A:CYS63 4.9 0.0 1.0
CB A:CYS63 4.9 0.0 1.0
HA A:TRP80 5.0 0.0 1.0

Iron binding site 2 out of 4 in 1neh

Go back to Iron Binding Sites List in 1neh
Iron binding site 2 out of 4 in the High Potential Iron-Sulfur Protein


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of High Potential Iron-Sulfur Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe86

b:0.0
occ:1.00
FE2 A:SF486 0.0 0.0 1.0
SG A:CYS46 2.0 0.0 1.0
S1 A:SF486 2.1 0.0 1.0
S3 A:SF486 2.2 0.0 1.0
S4 A:SF486 2.2 0.0 1.0
FE3 A:SF486 2.5 0.0 1.0
FE4 A:SF486 2.5 0.0 1.0
FE1 A:SF486 2.5 0.0 1.0
CB A:CYS46 3.0 0.0 1.0
HB3 A:CYS46 3.1 0.0 1.0
HB2 A:CYS46 3.1 0.0 1.0
O A:PHE48 3.3 0.0 1.0
HA A:TRP80 3.4 0.0 1.0
HB2 A:PHE48 3.4 0.0 1.0
HA A:CYS43 3.5 0.0 1.0
S2 A:SF486 3.6 0.0 1.0
O A:SER79 3.6 0.0 1.0
C A:PHE48 4.0 0.0 1.0
H A:PHE48 4.2 0.0 1.0
HB2 A:MET49 4.2 0.0 1.0
HD1 A:TRP80 4.2 0.0 1.0
SG A:CYS43 4.3 0.0 1.0
SG A:CYS77 4.3 0.0 1.0
SG A:CYS63 4.3 0.0 1.0
CB A:PHE48 4.4 0.0 1.0
CA A:CYS46 4.4 0.0 1.0
CA A:TRP80 4.4 0.0 1.0
CA A:CYS43 4.5 0.0 1.0
HB3 A:CYS43 4.5 0.0 1.0
CA A:PHE48 4.6 0.0 1.0
C A:SER79 4.6 0.0 1.0
HA A:MET49 4.6 0.0 1.0
N A:PHE48 4.6 0.0 1.0
CB A:CYS43 4.7 0.0 1.0
HB3 A:PHE48 4.7 0.0 1.0
HA A:CYS46 4.7 0.0 1.0
O A:TRP80 4.8 0.0 1.0
H A:CYS77 4.8 0.0 1.0
N A:MET49 4.8 0.0 1.0
HD2 A:PHE48 4.9 0.0 1.0
H A:GLN64 4.9 0.0 1.0
C A:CYS46 4.9 0.0 1.0
HA A:CYS63 4.9 0.0 1.0
N A:TRP80 4.9 0.0 1.0

Iron binding site 3 out of 4 in 1neh

Go back to Iron Binding Sites List in 1neh
Iron binding site 3 out of 4 in the High Potential Iron-Sulfur Protein


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of High Potential Iron-Sulfur Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe86

b:0.0
occ:1.00
FE3 A:SF486 0.0 0.0 1.0
SG A:CYS63 2.0 0.0 1.0
S1 A:SF486 2.1 0.0 1.0
S2 A:SF486 2.2 0.0 1.0
S4 A:SF486 2.2 0.0 1.0
FE2 A:SF486 2.5 0.0 1.0
FE4 A:SF486 2.5 0.0 1.0
FE1 A:SF486 2.5 0.0 1.0
CB A:CYS63 3.2 0.0 1.0
O A:PHE48 3.2 0.0 1.0
HB2 A:CYS63 3.2 0.0 1.0
HA A:CYS63 3.6 0.0 1.0
S3 A:SF486 3.6 0.0 1.0
HG12 A:ILE71 3.7 0.0 1.0
HG23 A:ILE71 3.8 0.0 1.0
HD2 A:PHE66 3.8 0.0 1.0
H A:GLN64 3.8 0.0 1.0
CA A:CYS63 3.9 0.0 1.0
H A:LEU65 4.0 0.0 1.0
HB3 A:CYS63 4.1 0.0 1.0
HB2 A:LEU65 4.2 0.0 1.0
HG A:LEU65 4.2 0.0 1.0
HB2 A:PHE48 4.3 0.0 1.0
SG A:CYS77 4.3 0.0 1.0
SG A:CYS46 4.3 0.0 1.0
SG A:CYS43 4.3 0.0 1.0
HA A:MET49 4.3 0.0 1.0
HD11 A:LEU65 4.3 0.0 1.0
C A:PHE48 4.4 0.0 1.0
N A:GLN64 4.6 0.0 1.0
C A:CYS63 4.7 0.0 1.0
HB3 A:PHE48 4.7 0.0 1.0
CG1 A:ILE71 4.7 0.0 1.0
HB3 A:CYS43 4.7 0.0 1.0
CG2 A:ILE71 4.8 0.0 1.0
CD2 A:PHE66 4.8 0.0 1.0
HB3 A:CYS77 4.8 0.0 1.0
H A:PHE66 4.8 0.0 1.0
HE2 A:PHE66 4.8 0.0 1.0
HD12 A:LEU17 4.8 0.0 1.0
HB3 A:CYS46 4.9 0.0 1.0
HA A:CYS43 4.9 0.0 1.0
CB A:PHE48 4.9 0.0 1.0
CG A:LEU65 5.0 0.0 1.0
N A:LEU65 5.0 0.0 1.0
O A:SER79 5.0 0.0 1.0
CB A:LEU65 5.0 0.0 1.0

Iron binding site 4 out of 4 in 1neh

Go back to Iron Binding Sites List in 1neh
Iron binding site 4 out of 4 in the High Potential Iron-Sulfur Protein


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of High Potential Iron-Sulfur Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe86

b:0.0
occ:1.00
FE4 A:SF486 0.0 0.0 1.0
SG A:CYS77 2.0 0.0 1.0
S1 A:SF486 2.1 0.0 1.0
S3 A:SF486 2.1 0.0 1.0
S2 A:SF486 2.2 0.0 1.0
FE2 A:SF486 2.5 0.0 1.0
FE1 A:SF486 2.5 0.0 1.0
FE3 A:SF486 2.5 0.0 1.0
HB3 A:CYS77 3.0 0.0 1.0
CB A:CYS77 3.1 0.0 1.0
O A:SER79 3.6 0.0 1.0
H A:CYS77 3.6 0.0 1.0
S4 A:SF486 3.6 0.0 1.0
N A:CYS77 3.9 0.0 1.0
CA A:CYS77 3.9 0.0 1.0
HB2 A:CYS77 4.0 0.0 1.0
HB2 A:SER79 4.0 0.0 1.0
HA A:TRP80 4.1 0.0 1.0
HD12 A:LEU17 4.1 0.0 1.0
HD11 A:LEU65 4.2 0.0 1.0
C A:SER79 4.2 0.0 1.0
SG A:CYS63 4.2 0.0 1.0
SG A:CYS46 4.2 0.0 1.0
SG A:CYS43 4.2 0.0 1.0
O A:CYS77 4.3 0.0 1.0
C A:CYS77 4.3 0.0 1.0
H A:SER79 4.6 0.0 1.0
HB2 A:PHE48 4.7 0.0 1.0
HB3 A:LEU17 4.7 0.0 1.0
HD2 A:TYR19 4.8 0.0 1.0
N A:TRP80 4.8 0.0 1.0
HA A:CYS43 4.9 0.0 1.0
HE2 A:PHE66 4.9 0.0 1.0
C A:TRP76 4.9 0.0 1.0
CB A:SER79 4.9 0.0 1.0
HA A:CYS77 4.9 0.0 1.0
CA A:TRP80 4.9 0.0 1.0
HG23 A:ILE71 4.9 0.0 1.0
CA A:SER79 4.9 0.0 1.0
N A:SER79 5.0 0.0 1.0
O A:PHE48 5.0 0.0 1.0
HB2 A:CYS46 5.0 0.0 1.0
HA A:TRP76 5.0 0.0 1.0

Reference:

I.Bertini, A.Dikiy, D.H.Kastrau, C.Luchinat, P.Sompornpisut. Three-Dimensional Solution Structure of the Oxidized High Potential Iron-Sulfur Protein From Chromatium Vinosum Through uc(Nmr). Comparative Analysis with the Solution Structure of the Reduced Species. Biochemistry V. 34 9851 1995.
ISSN: ISSN 0006-2960
PubMed: 7632685
DOI: 10.1021/BI00031A005
Page generated: Sat Aug 3 11:30:09 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy