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Iron in PDB 1o1i: Cyanomet Hemoglobin (A-Gly-C:V1M,L29F,H58Q; B,D:V1M,L106W)

Protein crystallography data

The structure of Cyanomet Hemoglobin (A-Gly-C:V1M,L29F,H58Q; B,D:V1M,L106W), PDB code: 1o1i was solved by E.A.Brucker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 2.30
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 56.671, 56.671, 185.834, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 26.7

Iron Binding Sites:

The binding sites of Iron atom in the Cyanomet Hemoglobin (A-Gly-C:V1M,L29F,H58Q; B,D:V1M,L106W) (pdb code 1o1i). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Cyanomet Hemoglobin (A-Gly-C:V1M,L29F,H58Q; B,D:V1M,L106W), PDB code: 1o1i:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1o1i

Go back to Iron Binding Sites List in 1o1i
Iron binding site 1 out of 2 in the Cyanomet Hemoglobin (A-Gly-C:V1M,L29F,H58Q; B,D:V1M,L106W)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cyanomet Hemoglobin (A-Gly-C:V1M,L29F,H58Q; B,D:V1M,L106W) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe150

b:27.8
occ:1.00
FE A:HEM150 0.0 27.8 1.0
C A:CYN151 1.9 21.9 1.0
ND A:HEM150 2.0 35.0 1.0
NC A:HEM150 2.0 35.8 1.0
NA A:HEM150 2.0 45.2 1.0
NB A:HEM150 2.0 28.0 1.0
NE2 A:HIS87 2.1 21.3 1.0
CE1 A:HIS87 3.0 20.4 1.0
C4D A:HEM150 3.1 41.1 1.0
C1C A:HEM150 3.1 33.9 1.0
C4A A:HEM150 3.1 36.0 1.0
C1B A:HEM150 3.1 32.7 1.0
C4C A:HEM150 3.1 38.2 1.0
C4B A:HEM150 3.1 32.2 1.0
C1D A:HEM150 3.1 38.9 1.0
N A:CYN151 3.1 57.5 1.0
C1A A:HEM150 3.1 41.8 1.0
CD2 A:HIS87 3.2 26.1 1.0
CHB A:HEM150 3.2 32.8 1.0
CHA A:HEM150 3.2 44.9 1.0
CHC A:HEM150 3.2 31.7 1.0
CHD A:HEM150 3.2 37.9 1.0
ND1 A:HIS87 4.2 16.9 1.0
CG A:HIS87 4.3 19.5 1.0
C3D A:HEM150 4.3 43.0 1.0
C2D A:HEM150 4.3 45.1 1.0
C2C A:HEM150 4.3 29.0 1.0
C3A A:HEM150 4.3 39.5 1.0
C2B A:HEM150 4.3 38.1 1.0
C2A A:HEM150 4.3 44.5 1.0
C3C A:HEM150 4.3 33.6 1.0
C3B A:HEM150 4.3 32.6 1.0
NE2 A:GLN58 4.8 60.7 1.0

Iron binding site 2 out of 2 in 1o1i

Go back to Iron Binding Sites List in 1o1i
Iron binding site 2 out of 2 in the Cyanomet Hemoglobin (A-Gly-C:V1M,L29F,H58Q; B,D:V1M,L106W)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cyanomet Hemoglobin (A-Gly-C:V1M,L29F,H58Q; B,D:V1M,L106W) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe150

b:32.9
occ:1.00
FE B:HEM150 0.0 32.9 1.0
C B:CYN151 1.9 25.4 1.0
NA B:HEM150 2.0 47.7 1.0
NB B:HEM150 2.0 27.7 1.0
ND B:HEM150 2.0 42.1 1.0
NC B:HEM150 2.0 31.9 1.0
NE2 B:HIS92 2.2 29.2 1.0
N B:CYN151 3.0 52.2 1.0
C4C B:HEM150 3.1 33.2 1.0
C4D B:HEM150 3.1 41.3 1.0
C1C B:HEM150 3.1 29.2 1.0
C4A B:HEM150 3.1 44.1 1.0
C1B B:HEM150 3.1 26.8 1.0
C4B B:HEM150 3.1 32.9 1.0
C1D B:HEM150 3.1 36.6 1.0
C1A B:HEM150 3.1 52.0 1.0
CE1 B:HIS92 3.1 32.8 1.0
CD2 B:HIS92 3.2 29.7 1.0
CHB B:HEM150 3.2 36.8 1.0
CHD B:HEM150 3.2 36.5 1.0
CHA B:HEM150 3.2 47.1 1.0
CHC B:HEM150 3.2 28.8 1.0
ND1 B:HIS92 4.2 29.7 1.0
CG B:HIS92 4.3 35.6 1.0
C3D B:HEM150 4.3 39.7 1.0
C2C B:HEM150 4.3 31.9 1.0
C3A B:HEM150 4.3 45.2 1.0
C2D B:HEM150 4.3 33.1 1.0
C2B B:HEM150 4.3 34.1 1.0
C2A B:HEM150 4.3 52.4 1.0
C3C B:HEM150 4.3 33.0 1.0
C3B B:HEM150 4.3 35.2 1.0
NE2 B:HIS63 4.6 34.6 1.0
CG2 B:VAL67 5.0 29.9 1.0

Reference:

E.A.Brucker, N/A. N/A N/A.
Page generated: Sat Aug 3 12:06:34 2024

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