Iron in PDB 1o2d: Crystal Structure of Alcohol Dehydrogenase, Iron-Containing (TM0920) From Thermotoga Maritima at 1.30 A Resolution

All present enzymatic activity of Crystal Structure of Alcohol Dehydrogenase, Iron-Containing (TM0920) From Thermotoga Maritima at 1.30 A Resolution:
1.1.1.1;

The structure of Crystal Structure of Alcohol Dehydrogenase, Iron-Containing (TM0920) From Thermotoga Maritima at 1.30 A Resolution, PDB code: 1o2d was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.19 / 1.30
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	58.047, 85.283, 72.080, 90.00, 96.29, 90.00
R / Rfree (%)	13.7 / 17

The binding sites of Iron atom in the Crystal Structure of Alcohol Dehydrogenase, Iron-Containing (TM0920) From Thermotoga Maritima at 1.30 A Resolution (pdb code 1o2d). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of Alcohol Dehydrogenase, Iron-Containing (TM0920) From Thermotoga Maritima at 1.30 A Resolution, PDB code: 1o2d:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of Alcohol Dehydrogenase, Iron-Containing (TM0920) From Thermotoga Maritima at 1.30 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Alcohol Dehydrogenase, Iron-Containing (TM0920) From Thermotoga Maritima at 1.30 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe900 b:12.2 occ:0.59 NE2 A:HIS256 2.1 13.3 0.7 OD1 A:ASP189 2.1 15.0 1.0 NE2 A:HIS270 2.2 17.1 1.0 NE2 A:HIS193 2.3 10.2 1.0 C5N A:NAP1800 2.4 23.7 1.0 CG A:ASP189 3.0 11.4 1.0 CD2 A:HIS270 3.1 15.4 1.0 CE1 A:HIS256 3.1 11.8 0.7 CE1 A:HIS193 3.1 10.6 1.0 CD2 A:HIS256 3.1 13.7 0.7 C6N A:NAP1800 3.2 24.5 1.0 OD2 A:ASP189 3.2 15.4 1.0 CE1 A:HIS270 3.2 17.0 1.0 CD2 A:HIS193 3.3 8.6 1.0 CE1 A:HIS256 3.5 12.4 0.3 C4N A:NAP1800 3.5 22.7 1.0 ND1 A:HIS256 3.6 13.3 0.3 ND1 A:HIS256 4.2 13.2 0.7 ND1 A:HIS193 4.2 8.7 1.0 CG A:HIS270 4.3 13.7 1.0 CG A:HIS256 4.3 11.5 0.7 ND1 A:HIS270 4.3 15.8 1.0 CG A:HIS193 4.4 7.4 1.0 CB A:ASP189 4.5 8.8 1.0 N1N A:NAP1800 4.5 16.1 1.0 OG A:SER192 4.6 15.9 0.7 O A:ASP189 4.7 8.2 1.0 C3N A:NAP1800 4.8 17.8 1.0 NE2 A:HIS256 4.8 13.8 0.3 CA A:ASP189 4.9 8.2 1.0

Iron binding site 2 out of 2 in the Crystal Structure of Alcohol Dehydrogenase, Iron-Containing (TM0920) From Thermotoga Maritima at 1.30 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Alcohol Dehydrogenase, Iron-Containing (TM0920) From Thermotoga Maritima at 1.30 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe900 b:10.3 occ:0.59 OD1 B:ASP189 2.1 13.5 1.0 NE2 B:HIS256 2.2 12.5 0.7 NE2 B:HIS270 2.2 15.0 1.0 NE2 B:HIS193 2.3 10.2 1.0 C5N B:NAP1801 2.6 27.4 1.0 CD2 B:HIS270 3.1 14.7 1.0 CG B:ASP189 3.1 11.4 1.0 CD2 B:HIS256 3.1 12.6 0.7 CE1 B:HIS256 3.1 13.6 0.7 CE1 B:HIS193 3.1 11.3 1.0 CE1 B:HIS270 3.2 16.4 1.0 C6N B:NAP1801 3.2 23.9 1.0 OD2 B:ASP189 3.3 13.8 1.0 CD2 B:HIS193 3.3 8.1 1.0 CE1 B:HIS256 3.6 14.1 0.3 C4N B:NAP1801 3.7 25.5 1.0 ND1 B:HIS256 3.8 14.8 0.3 ND1 B:HIS256 4.2 11.5 0.7 CG B:HIS270 4.3 13.4 1.0 ND1 B:HIS193 4.3 9.1 1.0 CG B:HIS256 4.3 11.0 0.7 ND1 B:HIS270 4.3 17.1 1.0 CG B:HIS193 4.4 8.9 1.0 CB B:ASP189 4.5 9.4 1.0 N1N B:NAP1801 4.6 20.0 1.0 O B:ASP189 4.7 8.0 1.0 CA B:ASP189 4.9 8.0 1.0 NE2 B:HIS256 4.9 16.2 0.3 C3N B:NAP1801 4.9 20.7 1.0

R.Schwarzenbacher, F.Von Delft, J.M.Canaves, L.S.Brinen, X.Dai, A.M.Deacon, M.A.Elsliger, S.Eshaghi, R.Floyd, A.Godzik, C.Grittini, S.K.Grzechnik, C.Guda, L.Jaroszewski, C.Karlak, H.E.Klock, E.Koesema, J.S.Kovarik, A.Kreusch, P.Kuhn, S.A.Lesley, D.Mcmullan, T.M.Mcphillips, M.A.Miller, M.D.Miller, A.Morse, K.Moy, J.Ouyang, R.Page, A.Robb, K.Rodrigues, T.L.Selby, G.Spraggon, R.C.Stevens, H.Van Den Bedem, J.Velasquez, J.Vincent, X.Wang, B.West, G.Wolf, K.O.Hodgson, J.Wooley, I.A.Wilson. Crystal Structure of An Iron-Containing 1,3-Propanediol Dehydrogenase (TM0920) From Thermotoga Maritima at 1.3 A Resolution Proteins V. 54 174 2004.
ISSN: ISSN 0887-3585
PubMed: 14705036
DOI: 10.1002/PROT.10594