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Iron in PDB 1ogv: Lipidic Cubic Phase Crystal Structure of the Photosynthetic Reaction Centre From Rhodobacter Sphaeroides

Protein crystallography data

The structure of Lipidic Cubic Phase Crystal Structure of the Photosynthetic Reaction Centre From Rhodobacter Sphaeroides, PDB code: 1ogv was solved by G.Katona, U.Andreasson, E.M.Landau, L.-E.Andreasson, R.Neutze, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.25 / 2.35
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 99.973, 99.973, 237.192, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 24.4

Other elements in 1ogv:

The structure of Lipidic Cubic Phase Crystal Structure of the Photosynthetic Reaction Centre From Rhodobacter Sphaeroides also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms
Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Lipidic Cubic Phase Crystal Structure of the Photosynthetic Reaction Centre From Rhodobacter Sphaeroides (pdb code 1ogv). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Lipidic Cubic Phase Crystal Structure of the Photosynthetic Reaction Centre From Rhodobacter Sphaeroides, PDB code: 1ogv:

Iron binding site 1 out of 1 in 1ogv

Go back to Iron Binding Sites List in 1ogv
Iron binding site 1 out of 1 in the Lipidic Cubic Phase Crystal Structure of the Photosynthetic Reaction Centre From Rhodobacter Sphaeroides


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Lipidic Cubic Phase Crystal Structure of the Photosynthetic Reaction Centre From Rhodobacter Sphaeroides within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Fe1307

b:28.2
occ:1.00
NE2 M:HIS219 2.1 22.6 1.0
OE2 M:GLU234 2.1 33.1 1.0
NE2 L:HIS190 2.2 24.7 1.0
NE2 L:HIS230 2.2 25.0 1.0
NE2 M:HIS266 2.3 27.0 1.0
OE1 M:GLU234 2.3 33.7 1.0
CD M:GLU234 2.5 35.8 1.0
CE1 M:HIS219 2.9 20.6 1.0
CE1 L:HIS190 3.0 21.8 1.0
CE1 M:HIS266 3.1 26.8 1.0
CD2 M:HIS219 3.2 20.0 1.0
CD2 L:HIS230 3.2 24.1 1.0
CE1 L:HIS230 3.2 25.3 1.0
CD2 L:HIS190 3.2 22.1 1.0
CD2 M:HIS266 3.4 25.9 1.0
CG M:GLU234 4.0 33.5 1.0
ND1 M:HIS219 4.1 20.4 1.0
ND1 L:HIS190 4.2 23.1 1.0
CG M:HIS219 4.2 22.9 1.0
ND1 M:HIS266 4.3 27.1 1.0
ND1 L:HIS230 4.3 24.9 1.0
CG L:HIS190 4.3 23.0 1.0
CG L:HIS230 4.3 26.8 1.0
CG M:HIS266 4.4 27.9 1.0
CG1 M:ILE223 4.5 25.9 1.0
O M:HOH2029 4.7 35.9 1.0
CG2 L:VAL194 4.7 23.6 1.0
CB M:GLU234 5.0 33.9 1.0

Reference:

G.Katona, U.Andreasson, E.M.Landau, L.-E.Andreasson, R.Neutze. Lipidic Cubic Phase Crystal Structure of the Photosynthetic Reaction Centre From Rhodobacter Sphaeroides at 2.35 A Resolution J.Mol.Biol. V. 331 681 2003.
ISSN: ISSN 0022-2836
PubMed: 12899837
DOI: 10.1016/S0022-2836(03)00751-4
Page generated: Sat Aug 3 12:29:04 2024

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