Iron in PDB 1pfd: The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures
Enzymatic activity of The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures
All present enzymatic activity of The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures:
1.7.7.2;
Iron Binding Sites:
The binding sites of Iron atom in the The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures
(pdb code 1pfd). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures, PDB code: 1pfd:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 1pfd
Go back to
Iron Binding Sites List in 1pfd
Iron binding site 1 out
of 2 in the The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe97
b:0.0
occ:1.00
|
FE1
|
A:FES97
|
0.0
|
0.0
|
1.0
|
S2
|
A:FES97
|
2.2
|
0.0
|
1.0
|
S1
|
A:FES97
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS44
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS39
|
2.3
|
0.0
|
1.0
|
FE2
|
A:FES97
|
2.6
|
0.0
|
1.0
|
HB3
|
A:CYS39
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS39
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS44
|
3.4
|
0.0
|
1.0
|
H
|
A:GLY42
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS44
|
3.4
|
0.0
|
1.0
|
H
|
A:ALA41
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS44
|
3.7
|
0.0
|
1.0
|
O
|
A:CYS39
|
3.8
|
0.0
|
1.0
|
C
|
A:CYS39
|
3.9
|
0.0
|
1.0
|
H
|
A:CYS39
|
3.9
|
0.0
|
1.0
|
H
|
A:SER43
|
4.0
|
0.0
|
1.0
|
CA
|
A:CYS39
|
4.0
|
0.0
|
1.0
|
SG
|
A:CYS47
|
4.1
|
0.0
|
1.0
|
N
|
A:CYS39
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS39
|
4.3
|
0.0
|
1.0
|
HA
|
A:ARG40
|
4.3
|
0.0
|
1.0
|
HB2
|
A:ALA41
|
4.3
|
0.0
|
1.0
|
HB2
|
A:SER38
|
4.3
|
0.0
|
1.0
|
N
|
A:GLY42
|
4.4
|
0.0
|
1.0
|
N
|
A:ALA41
|
4.5
|
0.0
|
1.0
|
HE1
|
A:HIS78
|
4.5
|
0.0
|
1.0
|
N
|
A:ARG40
|
4.5
|
0.0
|
1.0
|
HA2
|
A:GLY42
|
4.6
|
0.0
|
1.0
|
SG
|
A:CYS77
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS44
|
4.8
|
0.0
|
1.0
|
H
|
A:SER38
|
4.8
|
0.0
|
1.0
|
H
|
A:ARG40
|
4.9
|
0.0
|
1.0
|
HB3
|
A:CYS47
|
4.9
|
0.0
|
1.0
|
CA
|
A:ARG40
|
4.9
|
0.0
|
1.0
|
N
|
A:SER43
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS44
|
5.0
|
0.0
|
1.0
|
HD23
|
A:LEU75
|
5.0
|
0.0
|
1.0
|
|
Iron binding site 2 out
of 2 in 1pfd
Go back to
Iron Binding Sites List in 1pfd
Iron binding site 2 out
of 2 in the The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe97
b:0.0
occ:1.00
|
FE2
|
A:FES97
|
0.0
|
0.0
|
1.0
|
S2
|
A:FES97
|
2.2
|
0.0
|
1.0
|
S1
|
A:FES97
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS47
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS77
|
2.4
|
0.0
|
1.0
|
FE1
|
A:FES97
|
2.6
|
0.0
|
1.0
|
HB2
|
A:CYS47
|
3.1
|
0.0
|
1.0
|
CB
|
A:CYS47
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS47
|
3.1
|
0.0
|
1.0
|
HB2
|
A:CYS77
|
3.1
|
0.0
|
1.0
|
CB
|
A:CYS77
|
3.4
|
0.0
|
1.0
|
HD23
|
A:LEU75
|
3.5
|
0.0
|
1.0
|
O
|
A:CYS39
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS77
|
3.8
|
0.0
|
1.0
|
H
|
A:CYS39
|
3.8
|
0.0
|
1.0
|
H
|
A:SER38
|
3.9
|
0.0
|
1.0
|
HB2
|
A:CYS44
|
4.0
|
0.0
|
1.0
|
HD13
|
A:LEU75
|
4.3
|
0.0
|
1.0
|
HA
|
A:ARG40
|
4.3
|
0.0
|
1.0
|
HG
|
A:LEU75
|
4.4
|
0.0
|
1.0
|
SG
|
A:CYS44
|
4.4
|
0.0
|
1.0
|
C
|
A:CYS39
|
4.4
|
0.0
|
1.0
|
CD2
|
A:LEU75
|
4.4
|
0.0
|
1.0
|
HB3
|
A:CYS44
|
4.4
|
0.0
|
1.0
|
SG
|
A:CYS39
|
4.4
|
0.0
|
1.0
|
HE1
|
A:HIS78
|
4.5
|
0.0
|
1.0
|
HD1
|
A:HIS78
|
4.5
|
0.0
|
1.0
|
CB
|
A:CYS44
|
4.5
|
0.0
|
1.0
|
HD22
|
A:LEU75
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS47
|
4.6
|
0.0
|
1.0
|
H
|
A:ALA41
|
4.6
|
0.0
|
1.0
|
N
|
A:CYS39
|
4.6
|
0.0
|
1.0
|
HA
|
A:TYR37
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS77
|
4.7
|
0.0
|
1.0
|
H
|
A:GLY42
|
4.7
|
0.0
|
1.0
|
HB2
|
A:SER38
|
4.7
|
0.0
|
1.0
|
H
|
A:CYS77
|
4.8
|
0.0
|
1.0
|
HA2
|
A:GLY42
|
4.8
|
0.0
|
1.0
|
HD2
|
A:TYR37
|
4.9
|
0.0
|
1.0
|
CG
|
A:LEU75
|
4.9
|
0.0
|
1.0
|
N
|
A:CYS77
|
4.9
|
0.0
|
1.0
|
N
|
A:SER38
|
4.9
|
0.0
|
1.0
|
O
|
A:CYS47
|
4.9
|
0.0
|
1.0
|
CA
|
A:CYS39
|
4.9
|
0.0
|
1.0
|
|
Reference:
S.C.Im,
G.Liu,
C.Luchinat,
A.G.Sykes,
I.Bertini.
The Solution Structure of Parsley [2FE-2S]Ferredoxin. Eur.J.Biochem. V. 258 465 1998.
ISSN: ISSN 0014-2956
PubMed: 9874213
DOI: 10.1046/J.1432-1327.1998.2580465.X
Page generated: Sat Aug 3 13:04:00 2024
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