Atomistry » Iron » PDB 1phb-1q5d » 1pm1
Atomistry »
  Iron »
    PDB 1phb-1q5d »
      1pm1 »

Iron in PDB 1pm1: Crystal Structure of Nitrophorin 2 L122V/L132V Mutant Complex with Imidazole

Protein crystallography data

The structure of Crystal Structure of Nitrophorin 2 L122V/L132V Mutant Complex with Imidazole, PDB code: 1pm1 was solved by A.Weichsel, W.R.Montfort, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.64 / 1.10
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 39.310, 125.470, 33.880, 90.00, 90.00, 90.00
R / Rfree (%) 15.4 / 17.7

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Nitrophorin 2 L122V/L132V Mutant Complex with Imidazole (pdb code 1pm1). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Nitrophorin 2 L122V/L132V Mutant Complex with Imidazole, PDB code: 1pm1:

Iron binding site 1 out of 1 in 1pm1

Go back to Iron Binding Sites List in 1pm1
Iron binding site 1 out of 1 in the Crystal Structure of Nitrophorin 2 L122V/L132V Mutant Complex with Imidazole


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Nitrophorin 2 L122V/L132V Mutant Complex with Imidazole within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Fe180

b:6.7
occ:1.00
FE X:HEM180 0.0 6.7 1.0
NB X:HEM180 2.0 6.7 1.0
NA X:HEM180 2.0 7.5 1.0
NC X:HEM180 2.0 6.1 1.0
ND X:HEM180 2.0 7.2 1.0
NE2 X:HIS57 2.0 6.7 1.0
N1 X:IMD181 2.0 7.0 1.0
CE1 X:HIS57 3.0 6.6 1.0
C4D X:HEM180 3.0 8.5 1.0
C4B X:HEM180 3.0 6.7 1.0
C1C X:HEM180 3.0 7.0 1.0
C2 X:IMD181 3.0 8.6 1.0
C4A X:HEM180 3.0 7.8 1.0
C4C X:HEM180 3.0 7.0 1.0
C1D X:HEM180 3.0 7.2 1.0
C1A X:HEM180 3.0 7.4 1.0
C1B X:HEM180 3.0 7.2 1.0
C5 X:IMD181 3.1 8.0 1.0
CD2 X:HIS57 3.1 6.8 1.0
CHC X:HEM180 3.3 7.1 1.0
CHD X:HEM180 3.3 7.3 1.0
CHB X:HEM180 3.4 7.8 1.0
CHA X:HEM180 3.4 8.2 1.0
ND1 X:HIS57 4.1 6.9 1.0
N3 X:IMD181 4.1 7.5 1.0
C4 X:IMD181 4.1 6.9 1.0
CG X:HIS57 4.2 7.3 1.0
C3D X:HEM180 4.2 8.1 1.0
C2D X:HEM180 4.2 7.7 1.0
C3B X:HEM180 4.2 7.5 1.0
C3C X:HEM180 4.2 6.9 1.0
C3A X:HEM180 4.2 8.8 1.0
C2A X:HEM180 4.2 9.0 1.0
C2C X:HEM180 4.2 7.3 1.0
C2B X:HEM180 4.3 7.5 1.0

Reference:

A.Weichsel, W.R.Montfort. Conformational Change and Heme Ruffling in Nitrophorin 2, A Nitric Oxide Carrier From Kissing Bug To Be Published.
Page generated: Sat Aug 3 13:10:15 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy