Atomistry » Iron » PDB 1phb-1q5d » 1prh
Atomistry »
  Iron »
    PDB 1phb-1q5d »
      1prh »

Iron in PDB 1prh: The X-Ray Crystal Structure of the Membrane Protein Prostaglandin H2 Synthase-1

Enzymatic activity of The X-Ray Crystal Structure of the Membrane Protein Prostaglandin H2 Synthase-1

All present enzymatic activity of The X-Ray Crystal Structure of the Membrane Protein Prostaglandin H2 Synthase-1:
1.14.99.1;

Protein crystallography data

The structure of The X-Ray Crystal Structure of the Membrane Protein Prostaglandin H2 Synthase-1, PDB code: 1prh was solved by D.Picot, P.J.Loll, R.M.Garavito, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 3.50
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 99.400, 210.300, 233.100, 90.00, 90.00, 90.00
R / Rfree (%) 26.7 / 31.6

Iron Binding Sites:

The binding sites of Iron atom in the The X-Ray Crystal Structure of the Membrane Protein Prostaglandin H2 Synthase-1 (pdb code 1prh). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the The X-Ray Crystal Structure of the Membrane Protein Prostaglandin H2 Synthase-1, PDB code: 1prh:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1prh

Go back to Iron Binding Sites List in 1prh
Iron binding site 1 out of 2 in the The X-Ray Crystal Structure of the Membrane Protein Prostaglandin H2 Synthase-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The X-Ray Crystal Structure of the Membrane Protein Prostaglandin H2 Synthase-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:15.0
occ:1.00
FE A:HEM601 0.0 15.0 1.0
ND A:HEM601 1.9 15.0 1.0
NC A:HEM601 1.9 15.0 1.0
NB A:HEM601 2.0 15.0 1.0
NA A:HEM601 2.0 15.0 1.0
NE2 A:HIS388 2.1 15.0 1.0
C1D A:HEM601 3.0 15.0 1.0
C4C A:HEM601 3.0 15.0 1.0
C4D A:HEM601 3.0 15.0 1.0
C4B A:HEM601 3.0 15.0 1.0
C1C A:HEM601 3.0 15.0 1.0
C1B A:HEM601 3.0 15.0 1.0
C1A A:HEM601 3.0 15.0 1.0
C4A A:HEM601 3.0 15.0 1.0
CD2 A:HIS388 3.1 15.0 1.0
CE1 A:HIS388 3.1 15.0 1.0
CHD A:HEM601 3.3 15.0 1.0
CHA A:HEM601 3.4 15.0 1.0
CHC A:HEM601 3.4 15.0 1.0
CHB A:HEM601 3.4 15.0 1.0
CG A:HIS388 4.2 15.0 1.0
C2D A:HEM601 4.2 15.0 1.0
C3D A:HEM601 4.2 15.0 1.0
C3C A:HEM601 4.2 15.0 1.0
ND1 A:HIS388 4.2 15.0 1.0
C3B A:HEM601 4.2 15.0 1.0
C2C A:HEM601 4.3 15.0 1.0
C2B A:HEM601 4.3 15.0 1.0
C3A A:HEM601 4.3 15.0 1.0
C2A A:HEM601 4.3 15.0 1.0
NE2 A:HIS207 4.5 15.0 1.0
CE1 A:HIS207 4.6 15.0 1.0
OE1 A:GLN203 4.7 15.0 1.0

Iron binding site 2 out of 2 in 1prh

Go back to Iron Binding Sites List in 1prh
Iron binding site 2 out of 2 in the The X-Ray Crystal Structure of the Membrane Protein Prostaglandin H2 Synthase-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of The X-Ray Crystal Structure of the Membrane Protein Prostaglandin H2 Synthase-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe601

b:15.0
occ:1.00
FE B:HEM601 0.0 15.0 1.0
ND B:HEM601 1.9 15.0 1.0
NC B:HEM601 1.9 15.0 1.0
NB B:HEM601 2.0 15.0 1.0
NA B:HEM601 2.0 15.0 1.0
NE2 B:HIS388 2.1 15.0 1.0
C1D B:HEM601 3.0 15.0 1.0
C4C B:HEM601 3.0 15.0 1.0
C4D B:HEM601 3.0 15.0 1.0
C4B B:HEM601 3.0 15.0 1.0
C1C B:HEM601 3.0 15.0 1.0
C1B B:HEM601 3.0 15.0 1.0
C1A B:HEM601 3.0 15.0 1.0
C4A B:HEM601 3.0 15.0 1.0
CD2 B:HIS388 3.1 15.0 1.0
CE1 B:HIS388 3.1 15.0 1.0
CHD B:HEM601 3.3 15.0 1.0
CHA B:HEM601 3.4 15.0 1.0
CHC B:HEM601 3.4 15.0 1.0
CHB B:HEM601 3.4 15.0 1.0
CG B:HIS388 4.2 15.0 1.0
C2D B:HEM601 4.2 15.0 1.0
C3D B:HEM601 4.2 15.0 1.0
C3C B:HEM601 4.2 15.0 1.0
ND1 B:HIS388 4.2 15.0 1.0
C3B B:HEM601 4.2 15.0 1.0
C3A B:HEM601 4.3 15.0 1.0
C2C B:HEM601 4.3 15.0 1.0
C2B B:HEM601 4.3 15.0 1.0
C2A B:HEM601 4.3 15.0 1.0
NE2 B:HIS207 4.5 15.0 1.0
CE1 B:HIS207 4.6 15.0 1.0
OE1 B:GLN203 4.7 15.0 1.0

Reference:

D.Picot, P.J.Loll, R.M.Garavito. The X-Ray Crystal Structure of the Membrane Protein Prostaglandin H2 Synthase-1. Nature V. 367 243 1994.
ISSN: ISSN 0028-0836
PubMed: 8121489
DOI: 10.1038/367243A0
Page generated: Sun Dec 13 14:28:44 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy