Iron in PDB 1rcp: Cytochrome C'

The structure of Cytochrome C', PDB code: 1rcp was solved by T.H.Tahirov, S.Misaki, T.E.Meyer, M.A.Cusanovich, Y.Higuchi, N.Yasuoka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	6.00 / 2.00
Space group	I 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	47.185, 70.129, 88.712, 90.00, 86.82, 90.00
R / Rfree (%)	16.3 / n/a

The binding sites of Iron atom in the Cytochrome C' (pdb code 1rcp). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Cytochrome C', PDB code: 1rcp:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Cytochrome C'


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome C' within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe130 b:8.6 occ:1.00 FE A:HEM130 0.0 8.6 1.0 NA A:HEM130 1.9 7.5 1.0 NE2 A:HIS122 1.9 9.6 1.0 ND A:HEM130 1.9 8.6 1.0 NC A:HEM130 2.0 7.0 1.0 NB A:HEM130 2.0 6.7 1.0 CE1 A:HIS122 2.9 14.8 1.0 C1A A:HEM130 2.9 9.0 1.0 C4A A:HEM130 3.0 9.7 1.0 C4B A:HEM130 3.0 4.2 1.0 CD2 A:HIS122 3.0 8.9 1.0 C1C A:HEM130 3.0 8.3 1.0 C4D A:HEM130 3.0 9.8 1.0 C1D A:HEM130 3.0 9.7 1.0 C1B A:HEM130 3.0 5.6 1.0 C4C A:HEM130 3.1 6.6 1.0 CD1 A:PHE14 3.3 10.0 1.0 CHC A:HEM130 3.3 5.5 1.0 CHA A:HEM130 3.3 7.7 1.0 CHB A:HEM130 3.4 7.7 1.0 CHD A:HEM130 3.5 9.7 1.0 CE1 A:PHE14 3.5 10.2 1.0 CG A:PHE14 4.0 8.3 1.0 ND1 A:HIS122 4.1 12.2 1.0 CG A:HIS122 4.1 11.8 1.0 C2A A:HEM130 4.2 10.5 1.0 C3A A:HEM130 4.2 10.8 1.0 C3B A:HEM130 4.2 3.2 1.0 C2B A:HEM130 4.2 5.7 1.0 C3D A:HEM130 4.2 10.3 1.0 C2C A:HEM130 4.3 8.3 1.0 C2D A:HEM130 4.3 10.5 1.0 C3C A:HEM130 4.3 6.9 1.0 CZ A:PHE14 4.3 10.5 1.0 HH11 A:ARG126 4.3 10.0 1.0 HHC A:HEM130 4.4 10.0 1.0 HHA A:HEM130 4.4 10.0 1.0 HHB A:HEM130 4.5 10.0 1.0 HHD A:HEM130 4.5 10.0 1.0 CB A:PHE14 4.6 9.1 1.0 CD2 A:PHE14 4.7 7.6 1.0 CE2 A:PHE14 4.9 9.2 1.0 NH1 A:ARG126 4.9 21.3 1.0 HD1 A:HIS122 4.9 10.0 1.0

Iron binding site 2 out of 2 in the Cytochrome C'


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cytochrome C' within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe130 b:9.1 occ:1.00 FE B:HEM130 0.0 9.1 1.0 NA B:HEM130 1.9 7.2 1.0 NC B:HEM130 1.9 7.8 1.0 NE2 B:HIS122 2.0 8.9 1.0 NB B:HEM130 2.0 6.3 1.0 ND B:HEM130 2.0 9.5 1.0 CE1 B:HIS122 2.9 10.6 1.0 C1C B:HEM130 2.9 7.8 1.0 C4A B:HEM130 3.0 8.0 1.0 C4B B:HEM130 3.0 6.5 1.0 C1A B:HEM130 3.0 9.2 1.0 C4C B:HEM130 3.0 8.4 1.0 C1B B:HEM130 3.0 7.0 1.0 C4D B:HEM130 3.0 8.7 1.0 CD2 B:HIS122 3.0 8.0 1.0 C1D B:HEM130 3.1 10.2 1.0 CHC B:HEM130 3.3 8.6 1.0 CHB B:HEM130 3.4 7.7 1.0 CHA B:HEM130 3.4 9.0 1.0 CD1 B:PHE14 3.4 9.4 1.0 CHD B:HEM130 3.4 8.6 1.0 CE1 B:PHE14 3.5 10.2 1.0 CG B:PHE14 4.0 6.8 1.0 ND1 B:HIS122 4.0 9.7 1.0 CG B:HIS122 4.1 9.1 1.0 C2A B:HEM130 4.2 10.7 1.0 C3A B:HEM130 4.2 9.9 1.0 C2C B:HEM130 4.2 8.4 1.0 C3B B:HEM130 4.2 6.7 1.0 CZ B:PHE14 4.2 8.4 1.0 C3C B:HEM130 4.2 9.7 1.0 C2B B:HEM130 4.3 5.2 1.0 C3D B:HEM130 4.3 12.1 1.0 C2D B:HEM130 4.3 11.8 1.0 HHC B:HEM130 4.4 10.0 1.0 HHB B:HEM130 4.4 10.0 1.0 HHA B:HEM130 4.5 10.0 1.0 HHD B:HEM130 4.5 10.0 1.0 HH11 B:ARG126 4.6 10.0 1.0 CB B:PHE14 4.6 8.0 1.0 CD2 B:PHE14 4.6 5.3 1.0 CE2 B:PHE14 4.7 7.6 1.0 HD1 B:HIS122 4.9 10.0 1.0

T.H.Tahirov, S.Misaki, T.E.Meyer, M.A.Cusanovich, Y.Higuchi, N.Yasuoka. High-Resolution Crystal Structures of Two Polymorphs of Cytochrome C' From the Purple Phototrophic Bacterium Rhodobacter Capsulatus. J.Mol.Biol. V. 259 467 1996.
ISSN: ISSN 0022-2836
PubMed: 8676382
DOI: 10.1006/JMBI.1996.0333