Iron in PDB 1roe: uc(Nmr) Study of 2FE-2S Ferredoxin of Synechococcus Elongatus
Iron Binding Sites:
The binding sites of Iron atom in the uc(Nmr) Study of 2FE-2S Ferredoxin of Synechococcus Elongatus
(pdb code 1roe). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
uc(Nmr) Study of 2FE-2S Ferredoxin of Synechococcus Elongatus, PDB code: 1roe:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 1roe
Go back to
Iron Binding Sites List in 1roe
Iron binding site 1 out
of 2 in the uc(Nmr) Study of 2FE-2S Ferredoxin of Synechococcus Elongatus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of uc(Nmr) Study of 2FE-2S Ferredoxin of Synechococcus Elongatus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe98
b:0.0
occ:1.00
|
FE1
|
A:FES98
|
0.0
|
0.0
|
1.0
|
SG
|
A:CYS45
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS40
|
2.2
|
0.0
|
1.0
|
S2
|
A:FES98
|
2.3
|
0.0
|
1.0
|
S1
|
A:FES98
|
2.3
|
0.0
|
1.0
|
FE2
|
A:FES98
|
2.7
|
0.0
|
1.0
|
H
|
A:CYS45
|
2.8
|
0.0
|
1.0
|
HB3
|
A:CYS40
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS45
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS45
|
3.4
|
0.0
|
1.0
|
H
|
A:ARG41
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS40
|
3.4
|
0.0
|
1.0
|
H
|
A:ALA44
|
3.4
|
0.0
|
1.0
|
H
|
A:ALA42
|
3.4
|
0.0
|
1.0
|
N
|
A:CYS45
|
3.4
|
0.0
|
1.0
|
O
|
A:CYS45
|
3.6
|
0.0
|
1.0
|
N
|
A:ARG41
|
3.7
|
0.0
|
1.0
|
CA
|
A:CYS45
|
3.7
|
0.0
|
1.0
|
H
|
A:CYS40
|
3.8
|
0.0
|
1.0
|
C
|
A:CYS45
|
3.9
|
0.0
|
1.0
|
HB3
|
A:CYS48
|
4.0
|
0.0
|
1.0
|
C
|
A:CYS40
|
4.1
|
0.0
|
1.0
|
HA
|
A:ARG41
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS40
|
4.1
|
0.0
|
1.0
|
H
|
A:CYS48
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS40
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS45
|
4.2
|
0.0
|
1.0
|
N
|
A:ALA44
|
4.3
|
0.0
|
1.0
|
SG
|
A:CYS78
|
4.3
|
0.0
|
1.0
|
N
|
A:CYS40
|
4.3
|
0.0
|
1.0
|
SG
|
A:CYS48
|
4.4
|
0.0
|
1.0
|
N
|
A:ALA42
|
4.4
|
0.0
|
1.0
|
H
|
A:GLY43
|
4.4
|
0.0
|
1.0
|
CA
|
A:ARG41
|
4.4
|
0.0
|
1.0
|
H
|
A:THR47
|
4.5
|
0.0
|
1.0
|
C
|
A:ALA44
|
4.5
|
0.0
|
1.0
|
OG1
|
A:THR47
|
4.6
|
0.0
|
1.0
|
HB2
|
A:ALA44
|
4.6
|
0.0
|
1.0
|
CB
|
A:CYS48
|
4.7
|
0.0
|
1.0
|
O
|
A:VAL75
|
4.7
|
0.0
|
1.0
|
HG1
|
A:THR47
|
4.7
|
0.0
|
1.0
|
N
|
A:GLY43
|
4.7
|
0.0
|
1.0
|
O
|
A:PRO37
|
4.8
|
0.0
|
1.0
|
HA
|
A:CYS45
|
4.8
|
0.0
|
1.0
|
HA2
|
A:GLY43
|
4.8
|
0.0
|
1.0
|
CA
|
A:ALA44
|
4.9
|
0.0
|
1.0
|
HA
|
A:LEU76
|
4.9
|
0.0
|
1.0
|
O
|
A:CYS40
|
4.9
|
0.0
|
1.0
|
C
|
A:ARG41
|
4.9
|
0.0
|
1.0
|
H
|
A:SER39
|
5.0
|
0.0
|
1.0
|
N
|
A:SER46
|
5.0
|
0.0
|
1.0
|
|
Iron binding site 2 out
of 2 in 1roe
Go back to
Iron Binding Sites List in 1roe
Iron binding site 2 out
of 2 in the uc(Nmr) Study of 2FE-2S Ferredoxin of Synechococcus Elongatus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of uc(Nmr) Study of 2FE-2S Ferredoxin of Synechococcus Elongatus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe98
b:0.0
occ:1.00
|
FE2
|
A:FES98
|
0.0
|
0.0
|
1.0
|
SG
|
A:CYS78
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS48
|
2.2
|
0.0
|
1.0
|
S2
|
A:FES98
|
2.2
|
0.0
|
1.0
|
S1
|
A:FES98
|
2.2
|
0.0
|
1.0
|
FE1
|
A:FES98
|
2.7
|
0.0
|
1.0
|
H
|
A:CYS78
|
2.8
|
0.0
|
1.0
|
HB3
|
A:CYS78
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS48
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS78
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS48
|
3.3
|
0.0
|
1.0
|
HA
|
A:ARG41
|
3.4
|
0.0
|
1.0
|
N
|
A:CYS78
|
3.7
|
0.0
|
1.0
|
H
|
A:THR77
|
3.7
|
0.0
|
1.0
|
H
|
A:ALA42
|
3.9
|
0.0
|
1.0
|
HA
|
A:LEU76
|
3.9
|
0.0
|
1.0
|
HB2
|
A:CYS48
|
4.0
|
0.0
|
1.0
|
H
|
A:GLY43
|
4.0
|
0.0
|
1.0
|
H
|
A:ARG41
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS78
|
4.1
|
0.0
|
1.0
|
HB2
|
A:CYS78
|
4.1
|
0.0
|
1.0
|
O
|
A:VAL75
|
4.2
|
0.0
|
1.0
|
H
|
A:CYS48
|
4.2
|
0.0
|
1.0
|
CA
|
A:ARG41
|
4.2
|
0.0
|
1.0
|
SG
|
A:CYS45
|
4.3
|
0.0
|
1.0
|
SG
|
A:CYS40
|
4.3
|
0.0
|
1.0
|
N
|
A:THR77
|
4.4
|
0.0
|
1.0
|
N
|
A:ARG41
|
4.4
|
0.0
|
1.0
|
CA
|
A:CYS48
|
4.5
|
0.0
|
1.0
|
HB
|
A:THR77
|
4.5
|
0.0
|
1.0
|
N
|
A:ALA42
|
4.5
|
0.0
|
1.0
|
H
|
A:CYS45
|
4.6
|
0.0
|
1.0
|
O
|
A:CYS45
|
4.6
|
0.0
|
1.0
|
HA2
|
A:GLY43
|
4.7
|
0.0
|
1.0
|
H
|
A:ALA44
|
4.7
|
0.0
|
1.0
|
N
|
A:GLY43
|
4.7
|
0.0
|
1.0
|
N
|
A:CYS48
|
4.8
|
0.0
|
1.0
|
HA
|
A:CYS78
|
4.8
|
0.0
|
1.0
|
C
|
A:THR77
|
4.8
|
0.0
|
1.0
|
C
|
A:CYS48
|
4.8
|
0.0
|
1.0
|
C
|
A:ARG41
|
4.8
|
0.0
|
1.0
|
O
|
A:CYS48
|
4.9
|
0.0
|
1.0
|
CA
|
A:LEU76
|
4.9
|
0.0
|
1.0
|
C
|
A:LEU76
|
5.0
|
0.0
|
1.0
|
H
|
A:VAL79
|
5.0
|
0.0
|
1.0
|
|
Reference:
B.Baumann,
H.Sticht,
M.Scharpf,
M.Sutter,
W.Haehnel,
P.Rosch.
Structure of Synechococcus Elongatus [FE2S2] Ferredoxin in Solution. Biochemistry V. 35 12831 1996.
ISSN: ISSN 0006-2960
PubMed: 8841126
DOI: 10.1021/BI961144M
Page generated: Sat Aug 3 14:16:50 2024
|