Iron in PDB 1rof: uc(Nmr) Study of 4FE-4S Ferredoxin of Thermatoga Maritima

The binding sites of Iron atom in the uc(Nmr) Study of 4FE-4S Ferredoxin of Thermatoga Maritima (pdb code 1rof). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the uc(Nmr) Study of 4FE-4S Ferredoxin of Thermatoga Maritima, PDB code: 1rof:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the uc(Nmr) Study of 4FE-4S Ferredoxin of Thermatoga Maritima


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of uc(Nmr) Study of 4FE-4S Ferredoxin of Thermatoga Maritima within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe61 b:0.0 occ:1.00 FE1 A:SF461 0.0 0.0 1.0 S2 A:SF461 2.3 0.0 1.0 S4 A:SF461 2.3 0.0 1.0 S3 A:SF461 2.3 0.0 1.0 SG A:CYS10 2.3 0.0 1.0 HB2 A:ALA32 2.4 0.0 1.0 FE3 A:SF461 2.7 0.0 1.0 FE4 A:SF461 2.7 0.0 1.0 FE2 A:SF461 2.7 0.0 1.0 HB1 A:ALA32 3.1 0.0 1.0 HG23 A:THR53 3.2 0.0 1.0 CB A:ALA32 3.2 0.0 1.0 H A:ILE11 3.2 0.0 1.0 O A:ALA32 3.4 0.0 1.0 HB2 A:CYS10 3.4 0.0 1.0 CB A:CYS10 3.4 0.0 1.0 HA A:CYS10 3.5 0.0 1.0 H A:CYS13 3.5 0.0 1.0 H A:GLY12 3.8 0.0 1.0 S1 A:SF461 3.8 0.0 1.0 HB3 A:ALA32 3.9 0.0 1.0 CA A:CYS10 3.9 0.0 1.0 HG22 A:THR53 4.0 0.0 1.0 N A:ILE11 4.0 0.0 1.0 CG2 A:THR53 4.0 0.0 1.0 HB A:THR53 4.2 0.0 1.0 HA2 A:GLY12 4.2 0.0 1.0 C A:ALA32 4.2 0.0 1.0 N A:GLY12 4.2 0.0 1.0 CA A:ALA32 4.3 0.0 1.0 H A:GLY14 4.3 0.0 1.0 HB3 A:CYS10 4.4 0.0 1.0 H A:ALA32 4.4 0.0 1.0 HD2 A:PRO52 4.4 0.0 1.0 C A:CYS10 4.4 0.0 1.0 N A:CYS13 4.5 0.0 1.0 HG21 A:ILE11 4.6 0.0 1.0 CB A:THR53 4.7 0.0 1.0 CA A:GLY12 4.7 0.0 1.0 SG A:CYS16 4.8 0.0 1.0 SG A:CYS51 4.8 0.0 1.0 SG A:CYS13 4.8 0.0 1.0 N A:ALA32 4.8 0.0 1.0 H A:VAL15 4.8 0.0 1.0 HG21 A:THR53 4.8 0.0 1.0 C A:ILE11 4.9 0.0 1.0

Iron binding site 2 out of 4 in the uc(Nmr) Study of 4FE-4S Ferredoxin of Thermatoga Maritima


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of uc(Nmr) Study of 4FE-4S Ferredoxin of Thermatoga Maritima within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe61 b:0.0 occ:1.00 FE2 A:SF461 0.0 0.0 1.0 S1 A:SF461 2.2 0.0 1.0 S4 A:SF461 2.3 0.0 1.0 S3 A:SF461 2.3 0.0 1.0 SG A:CYS13 2.3 0.0 1.0 H A:GLY14 2.6 0.0 1.0 H A:VAL15 2.7 0.0 1.0 FE3 A:SF461 2.7 0.0 1.0 FE4 A:SF461 2.7 0.0 1.0 FE1 A:SF461 2.7 0.0 1.0 HB A:VAL15 2.8 0.0 1.0 HD2 A:PRO52 2.9 0.0 1.0 H A:CYS13 2.9 0.0 1.0 CB A:CYS13 3.5 0.0 1.0 N A:GLY14 3.5 0.0 1.0 N A:VAL15 3.5 0.0 1.0 HB3 A:CYS13 3.5 0.0 1.0 HG2 A:PRO52 3.6 0.0 1.0 CD A:PRO52 3.7 0.0 1.0 N A:CYS13 3.7 0.0 1.0 S2 A:SF461 3.8 0.0 1.0 CB A:VAL15 3.8 0.0 1.0 HD3 A:PRO52 3.9 0.0 1.0 CA A:CYS13 4.0 0.0 1.0 CG A:PRO52 4.1 0.0 1.0 H A:CYS16 4.1 0.0 1.0 HA A:CYS51 4.1 0.0 1.0 C A:CYS13 4.2 0.0 1.0 HG23 A:THR53 4.2 0.0 1.0 HG3 A:PRO52 4.2 0.0 1.0 CA A:VAL15 4.3 0.0 1.0 HG13 A:VAL15 4.3 0.0 1.0 HB2 A:ALA32 4.3 0.0 1.0 H A:ILE11 4.4 0.0 1.0 HG21 A:ILE11 4.4 0.0 1.0 HB2 A:CYS13 4.4 0.0 1.0 C A:GLY14 4.4 0.0 1.0 CA A:GLY14 4.5 0.0 1.0 CG1 A:VAL15 4.6 0.0 1.0 HG22 A:VAL15 4.6 0.0 1.0 HA2 A:GLY14 4.7 0.0 1.0 N A:CYS16 4.7 0.0 1.0 H A:THR53 4.7 0.0 1.0 SG A:CYS16 4.7 0.0 1.0 SG A:CYS51 4.8 0.0 1.0 SG A:CYS10 4.8 0.0 1.0 HB1 A:ALA32 4.8 0.0 1.0 HG12 A:VAL15 4.8 0.0 1.0 CG2 A:VAL15 4.8 0.0 1.0 C A:VAL15 4.9 0.0 1.0 C A:GLY12 4.9 0.0 1.0 HA2 A:GLY12 5.0 0.0 1.0 N A:PRO52 5.0 0.0 1.0 CB A:ALA32 5.0 0.0 1.0

Iron binding site 3 out of 4 in the uc(Nmr) Study of 4FE-4S Ferredoxin of Thermatoga Maritima


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of uc(Nmr) Study of 4FE-4S Ferredoxin of Thermatoga Maritima within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe61 b:0.0 occ:1.00 FE3 A:SF461 0.0 0.0 1.0 S1 A:SF461 2.2 0.0 1.0 S4 A:SF461 2.2 0.0 1.0 S2 A:SF461 2.3 0.0 1.0 SG A:CYS16 2.3 0.0 1.0 FE2 A:SF461 2.7 0.0 1.0 FE1 A:SF461 2.7 0.0 1.0 FE4 A:SF461 2.7 0.0 1.0 HB2 A:ALA32 2.8 0.0 1.0 H A:CYS16 3.0 0.0 1.0 HB3 A:CYS16 3.1 0.0 1.0 H A:VAL15 3.2 0.0 1.0 CB A:CYS16 3.3 0.0 1.0 N A:CYS16 3.6 0.0 1.0 CB A:ALA32 3.6 0.0 1.0 HB3 A:ALA32 3.7 0.0 1.0 H A:GLY14 3.8 0.0 1.0 S3 A:SF461 3.8 0.0 1.0 N A:VAL15 4.0 0.0 1.0 CA A:CYS16 4.1 0.0 1.0 HB1 A:ALA32 4.1 0.0 1.0 HB2 A:CYS16 4.2 0.0 1.0 HB A:VAL15 4.2 0.0 1.0 O A:ALA32 4.3 0.0 1.0 HG13 A:VAL15 4.4 0.0 1.0 C A:VAL15 4.4 0.0 1.0 H A:GLU17 4.4 0.0 1.0 H A:CYS13 4.4 0.0 1.0 HG23 A:THR53 4.5 0.0 1.0 HD2 A:PRO52 4.6 0.0 1.0 N A:GLY14 4.6 0.0 1.0 HA2 A:GLY14 4.6 0.0 1.0 O A:GLN25 4.6 0.0 1.0 CA A:VAL15 4.7 0.0 1.0 HA A:CYS16 4.7 0.0 1.0 SG A:CYS13 4.7 0.0 1.0 SG A:CYS10 4.8 0.0 1.0 SG A:CYS51 4.8 0.0 1.0 CB A:VAL15 4.8 0.0 1.0 C A:ALA32 4.9 0.0 1.0 CA A:ALA32 4.9 0.0 1.0 HA A:CYS51 4.9 0.0 1.0 C A:GLY14 5.0 0.0 1.0 CA A:GLY14 5.0 0.0 1.0

Iron binding site 4 out of 4 in the uc(Nmr) Study of 4FE-4S Ferredoxin of Thermatoga Maritima


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of uc(Nmr) Study of 4FE-4S Ferredoxin of Thermatoga Maritima within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe61 b:0.0 occ:1.00 FE4 A:SF461 0.0 0.0 1.0 HG23 A:THR53 2.2 0.0 1.0 S1 A:SF461 2.2 0.0 1.0 S2 A:SF461 2.3 0.0 1.0 S3 A:SF461 2.3 0.0 1.0 SG A:CYS51 2.3 0.0 1.0 HD2 A:PRO52 2.7 0.0 1.0 FE2 A:SF461 2.7 0.0 1.0 FE1 A:SF461 2.7 0.0 1.0 FE3 A:SF461 2.7 0.0 1.0 CG2 A:THR53 3.2 0.0 1.0 HA A:CYS51 3.3 0.0 1.0 H A:THR53 3.3 0.0 1.0 CB A:CYS51 3.4 0.0 1.0 HB2 A:CYS51 3.5 0.0 1.0 HG21 A:THR53 3.5 0.0 1.0 CD A:PRO52 3.7 0.0 1.0 HG22 A:THR53 3.7 0.0 1.0 CA A:CYS51 3.8 0.0 1.0 S4 A:SF461 3.8 0.0 1.0 HG13 A:VAL15 4.0 0.0 1.0 HB A:VAL15 4.1 0.0 1.0 HB A:THR53 4.1 0.0 1.0 HD3 A:PRO52 4.2 0.0 1.0 CB A:THR53 4.2 0.0 1.0 HB1 A:ALA55 4.2 0.0 1.0 N A:THR53 4.3 0.0 1.0 N A:PRO52 4.3 0.0 1.0 HB3 A:CYS16 4.3 0.0 1.0 C A:CYS51 4.4 0.0 1.0 HG2 A:PRO52 4.4 0.0 1.0 HB3 A:CYS51 4.4 0.0 1.0 HB2 A:ALA32 4.4 0.0 1.0 HA A:CYS10 4.5 0.0 1.0 H A:VAL15 4.5 0.0 1.0 H A:ALA55 4.7 0.0 1.0 CG A:PRO52 4.7 0.0 1.0 CG1 A:VAL15 4.7 0.0 1.0 HB2 A:CYS10 4.8 0.0 1.0 SG A:CYS13 4.8 0.0 1.0 HG12 A:VAL15 4.8 0.0 1.0 SG A:CYS16 4.8 0.0 1.0 SG A:CYS10 4.8 0.0 1.0 CA A:THR53 4.8 0.0 1.0 CB A:VAL15 4.8 0.0 1.0 H A:ILE11 4.9 0.0 1.0 O A:ALA32 4.9 0.0 1.0 H A:CYS16 5.0 0.0 1.0

H.Sticht, G.Wildegger, D.Bentrop, B.Darimont, R.Sterner, P.Rosch. An uc(Nmr)-Derived Model For the Solution Structure of Oxidized Thermotoga Maritima 1[FE4-S4] Ferredoxin. Eur.J.Biochem. V. 237 726 1996.
ISSN: ISSN 0014-2956
PubMed: 8647119
DOI: 10.1111/J.1432-1033.1996.0726P.X