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Iron in PDB 1rom: Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum

Protein crystallography data

The structure of Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum, PDB code: 1rom was solved by S.-Y.Park, A.Nakagawa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.990, 82.660, 87.210, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 26.6

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum (pdb code 1rom). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum, PDB code: 1rom:

Iron binding site 1 out of 1 in 1rom

Go back to Iron Binding Sites List in 1rom
Iron binding site 1 out of 1 in the Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:11.4
occ:1.00
FE A:HEM501 0.0 11.4 1.0
NC A:HEM501 2.0 10.7 1.0
NA A:HEM501 2.0 9.4 1.0
ND A:HEM501 2.0 9.9 1.0
NB A:HEM501 2.0 9.8 1.0
SG A:CYS352 2.5 6.6 1.0
C4C A:HEM501 3.0 12.0 1.0
C1C A:HEM501 3.0 12.3 1.0
C1A A:HEM501 3.0 9.5 1.0
C1D A:HEM501 3.0 7.6 1.0
C4B A:HEM501 3.0 11.0 1.0
C4D A:HEM501 3.1 7.9 1.0
C4A A:HEM501 3.1 8.4 1.0
C1B A:HEM501 3.1 9.4 1.0
CHD A:HEM501 3.4 10.6 1.0
CHC A:HEM501 3.4 13.8 1.0
CHA A:HEM501 3.4 10.4 1.0
CB A:CYS352 3.4 3.3 1.0
CHB A:HEM501 3.5 4.4 1.0
CA A:CYS352 4.2 5.1 1.0
C3C A:HEM501 4.2 12.1 1.0
C2C A:HEM501 4.3 10.6 1.0
C2A A:HEM501 4.3 11.1 1.0
C2D A:HEM501 4.3 7.7 1.0
C3B A:HEM501 4.3 11.5 1.0
C3D A:HEM501 4.3 5.9 1.0
C3A A:HEM501 4.3 9.6 1.0
C2B A:HEM501 4.4 8.1 1.0
O A:HOH573 4.5 26.2 1.0
CA A:GLY240 4.9 8.8 1.0
C A:CYS352 5.0 6.7 1.0

Reference:

S.Y.Park, H.Shimizu, S.Adachi, A.Nakagawa, I.Tanaka, K.Nakahara, H.Shoun, E.Obayashi, H.Nakamura, T.Iizuka, Y.Shiro. Crystal Structure of Nitric Oxide Reductase From Denitrifying Fungus Fusarium Oxysporum. Nat.Struct.Biol. V. 4 827 1997.
ISSN: ISSN 1072-8368
PubMed: 9334748
DOI: 10.1038/NSB1097-827
Page generated: Sat Aug 3 14:18:15 2024

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