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Iron in PDB 1rrm: Crystal Structure of Lactaldehyde Reductase

Enzymatic activity of Crystal Structure of Lactaldehyde Reductase

All present enzymatic activity of Crystal Structure of Lactaldehyde Reductase:
1.1.1.77;

Protein crystallography data

The structure of Crystal Structure of Lactaldehyde Reductase, PDB code: 1rrm was solved by D.Kumaran, S.Swaminathan, S.K.Burley, New York Sgx Researchcenter For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 61.766, 97.527, 69.514, 90.00, 113.63, 90.00
R / Rfree (%) 19.3 / 21.1

Other elements in 1rrm:

The structure of Crystal Structure of Lactaldehyde Reductase also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Lactaldehyde Reductase (pdb code 1rrm). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of Lactaldehyde Reductase, PDB code: 1rrm:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1rrm

Go back to Iron Binding Sites List in 1rrm
Iron binding site 1 out of 2 in the Crystal Structure of Lactaldehyde Reductase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Lactaldehyde Reductase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe388

b:28.9
occ:1.00
SG A:CYS362 2.4 21.3 1.0
CB A:CYS362 3.2 18.3 1.0
O A:HOH452 3.6 18.8 1.0
CA A:CYS362 3.6 19.1 1.0
CD1 A:LEU259 3.7 15.0 1.0
CG A:LEU259 3.9 13.6 1.0
O A:HOH451 4.0 19.3 1.0
CB A:LEU259 4.0 14.0 1.0
N A:LEU259 4.1 13.3 1.0
N A:CYS362 4.3 20.9 1.0
OD1 A:ASN151 4.6 23.8 1.0
CA A:LEU259 4.7 13.3 1.0
CA A:GLY258 4.8 14.0 1.0
C A:GLY258 4.8 13.3 1.0
C A:CYS362 4.9 18.4 1.0
C2 A:PGO390 5.0 21.8 1.0

Iron binding site 2 out of 2 in 1rrm

Go back to Iron Binding Sites List in 1rrm
Iron binding site 2 out of 2 in the Crystal Structure of Lactaldehyde Reductase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Lactaldehyde Reductase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe388

b:23.9
occ:1.00
SG B:CYS362 2.5 18.1 1.0
CB B:CYS362 3.3 16.7 1.0
O B:HOH514 3.6 17.2 1.0
CA B:CYS362 3.7 16.2 1.0
O B:HOH433 3.7 14.1 1.0
CD1 B:LEU259 3.7 9.8 1.0
CG B:LEU259 3.9 8.2 1.0
CB B:LEU259 3.9 10.7 1.0
N B:LEU259 4.0 10.3 1.0
N B:CYS362 4.4 17.1 1.0
CA B:LEU259 4.6 9.7 1.0
C B:GLY258 4.7 10.2 1.0
CA B:GLY258 4.7 12.1 1.0
C B:CYS362 4.9 14.3 1.0
O B:CYS362 5.0 14.7 1.0

Reference:

D.Kumaran, S.Swaminathan. Crystal Structure of Lactaldehyde Reductase To Be Published.
Page generated: Sun Dec 13 14:30:45 2020

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