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Iron in PDB 1rvj: Photosynthetic Reaction Center Double Mutant From Rhodobacter Sphaeroides with Asp L213 Replaced with Asn and Arg H177 Replaced with His

Protein crystallography data

The structure of Photosynthetic Reaction Center Double Mutant From Rhodobacter Sphaeroides with Asp L213 Replaced with Asn and Arg H177 Replaced with His, PDB code: 1rvj was solved by Q.Xu, H.L.Axelrod, E.C.Abresch, M.L.Paddock, M.Y.Okamura, G.Feher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.00 / 2.75
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 138.242, 138.242, 184.396, 90.00, 90.00, 120.00
R / Rfree (%) 21.8 / 23.7

Other elements in 1rvj:

The structure of Photosynthetic Reaction Center Double Mutant From Rhodobacter Sphaeroides with Asp L213 Replaced with Asn and Arg H177 Replaced with His also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Photosynthetic Reaction Center Double Mutant From Rhodobacter Sphaeroides with Asp L213 Replaced with Asn and Arg H177 Replaced with His (pdb code 1rvj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Photosynthetic Reaction Center Double Mutant From Rhodobacter Sphaeroides with Asp L213 Replaced with Asn and Arg H177 Replaced with His, PDB code: 1rvj:

Iron binding site 1 out of 1 in 1rvj

Go back to Iron Binding Sites List in 1rvj
Iron binding site 1 out of 1 in the Photosynthetic Reaction Center Double Mutant From Rhodobacter Sphaeroides with Asp L213 Replaced with Asn and Arg H177 Replaced with His


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Photosynthetic Reaction Center Double Mutant From Rhodobacter Sphaeroides with Asp L213 Replaced with Asn and Arg H177 Replaced with His within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Fe857

b:46.0
occ:1.00
OE2 M:GLU234 2.1 49.7 1.0
NE2 L:HIS190 2.1 46.4 1.0
NE2 M:HIS219 2.1 48.9 1.0
NE2 M:HIS266 2.2 41.2 1.0
OE1 M:GLU234 2.2 50.2 1.0
NE2 L:HIS230 2.2 43.7 1.0
CD M:GLU234 2.4 47.4 1.0
CE1 L:HIS190 3.0 45.0 1.0
CE1 L:HIS230 3.0 43.4 1.0
CE1 M:HIS266 3.1 43.4 1.0
CE1 M:HIS219 3.1 48.2 1.0
CD2 M:HIS219 3.2 46.7 1.0
CD2 L:HIS190 3.2 47.2 1.0
CD2 M:HIS266 3.2 42.0 1.0
CD2 L:HIS230 3.3 45.5 1.0
CG M:GLU234 4.0 46.6 1.0
ND1 L:HIS190 4.2 45.7 1.0
ND1 L:HIS230 4.2 41.5 1.0
ND1 M:HIS266 4.2 41.0 1.0
ND1 M:HIS219 4.3 46.8 1.0
CG L:HIS190 4.3 46.8 1.0
CG M:HIS219 4.3 46.6 1.0
CG M:HIS266 4.3 42.0 1.0
CG L:HIS230 4.3 42.1 1.0
CG1 M:ILE223 4.5 39.5 1.0
CG2 L:VAL194 4.6 38.5 1.0
CB M:GLU234 4.8 46.6 1.0
CD1 M:ILE223 4.9 38.8 1.0

Reference:

Q.Xu, H.L.Axelrod, E.C.Abresch, M.L.Paddock, M.Y.Okamura, G.Feher. X-Ray Structure Determination of Three Mutants of the Bacterial Photosynthetic Reaction Centers From Rb. Sphaeroides; Altered Proton Transfer Pathways. Structure V. 12 703 2004.
ISSN: ISSN 0969-2126
PubMed: 15062092
DOI: 10.1016/J.STR.2004.03.001
Page generated: Sat Aug 3 14:30:05 2024

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