Iron in PDB 1suv: Structure of Human Transferrin Receptor-Transferrin Complex
Iron Binding Sites:
The binding sites of Iron atom in the Structure of Human Transferrin Receptor-Transferrin Complex
(pdb code 1suv). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the
Structure of Human Transferrin Receptor-Transferrin Complex, PDB code: 1suv:
Jump to Iron binding site number:
1;
2;
3;
4;
Iron binding site 1 out
of 4 in 1suv
Go back to
Iron Binding Sites List in 1suv
Iron binding site 1 out
of 4 in the Structure of Human Transferrin Receptor-Transferrin Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Structure of Human Transferrin Receptor-Transferrin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe339
b:20.4
occ:1.00
|
OH
|
C:TYR188
|
1.8
|
18.2
|
1.0
|
OH
|
C:TYR95
|
2.0
|
20.6
|
1.0
|
O2
|
C:CO3338
|
2.0
|
10.5
|
0.3
|
OD1
|
C:ASP63
|
2.0
|
19.1
|
1.0
|
NE2
|
C:HIS249
|
2.0
|
22.0
|
1.0
|
O1
|
C:CO3338
|
2.1
|
13.4
|
0.7
|
O2
|
C:CO3338
|
2.2
|
28.7
|
0.7
|
O1
|
C:CO3338
|
2.4
|
20.1
|
0.3
|
C
|
C:CO3338
|
2.5
|
19.4
|
0.7
|
C
|
C:CO3338
|
2.5
|
19.9
|
0.3
|
CZ
|
C:TYR188
|
2.9
|
25.2
|
1.0
|
CE1
|
C:HIS249
|
2.9
|
21.4
|
1.0
|
CZ
|
C:TYR95
|
3.1
|
27.2
|
1.0
|
CD2
|
C:HIS249
|
3.1
|
22.1
|
1.0
|
CG
|
C:ASP63
|
3.2
|
21.6
|
1.0
|
CE2
|
C:TYR95
|
3.6
|
21.5
|
1.0
|
CE1
|
C:TYR188
|
3.7
|
21.8
|
1.0
|
CB
|
C:ASP63
|
3.7
|
18.7
|
1.0
|
CE2
|
C:TYR188
|
3.8
|
22.8
|
1.0
|
O3
|
C:CO3338
|
3.8
|
15.8
|
0.3
|
O3
|
C:CO3338
|
3.8
|
8.9
|
0.7
|
ND1
|
C:HIS249
|
4.1
|
21.7
|
1.0
|
CE1
|
C:TYR95
|
4.1
|
25.3
|
1.0
|
OD2
|
C:ASP63
|
4.2
|
22.2
|
1.0
|
CG
|
C:HIS249
|
4.2
|
21.6
|
1.0
|
NZ
|
C:LYS296
|
4.3
|
23.7
|
1.0
|
NH2
|
C:ARG124
|
4.3
|
38.3
|
0.7
|
CA
|
C:ASP63
|
4.5
|
17.7
|
1.0
|
CB
|
C:SER125
|
4.7
|
19.0
|
1.0
|
NE
|
C:ARG124
|
4.9
|
46.0
|
0.7
|
N
|
C:ALA126
|
4.9
|
20.1
|
1.0
|
CD
|
C:LYS296
|
4.9
|
24.9
|
1.0
|
CD2
|
C:TYR95
|
4.9
|
21.9
|
1.0
|
N
|
C:SER125
|
5.0
|
19.6
|
1.0
|
CD1
|
C:TYR188
|
5.0
|
22.4
|
1.0
|
OG
|
C:SER125
|
5.0
|
21.4
|
1.0
|
|
Iron binding site 2 out
of 4 in 1suv
Go back to
Iron Binding Sites List in 1suv
Iron binding site 2 out
of 4 in the Structure of Human Transferrin Receptor-Transferrin Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Structure of Human Transferrin Receptor-Transferrin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe339
b:20.4
occ:1.00
|
OH
|
D:TYR188
|
1.8
|
18.2
|
1.0
|
OH
|
D:TYR95
|
2.0
|
20.6
|
1.0
|
O2
|
D:CO3338
|
2.0
|
10.5
|
0.3
|
OD1
|
D:ASP63
|
2.0
|
19.1
|
1.0
|
NE2
|
D:HIS249
|
2.0
|
22.0
|
1.0
|
O1
|
D:CO3338
|
2.1
|
13.4
|
0.7
|
O2
|
D:CO3338
|
2.2
|
28.7
|
0.7
|
O1
|
D:CO3338
|
2.4
|
20.1
|
0.3
|
C
|
D:CO3338
|
2.5
|
19.4
|
0.7
|
C
|
D:CO3338
|
2.5
|
19.9
|
0.3
|
CZ
|
D:TYR188
|
2.9
|
25.2
|
1.0
|
CE1
|
D:HIS249
|
2.9
|
21.4
|
1.0
|
CZ
|
D:TYR95
|
3.1
|
27.2
|
1.0
|
CD2
|
D:HIS249
|
3.1
|
22.1
|
1.0
|
CG
|
D:ASP63
|
3.2
|
21.6
|
1.0
|
CE2
|
D:TYR95
|
3.6
|
21.5
|
1.0
|
CE1
|
D:TYR188
|
3.7
|
21.8
|
1.0
|
CB
|
D:ASP63
|
3.7
|
18.7
|
1.0
|
CE2
|
D:TYR188
|
3.8
|
22.8
|
1.0
|
O3
|
D:CO3338
|
3.8
|
15.8
|
0.3
|
O3
|
D:CO3338
|
3.8
|
8.9
|
0.7
|
ND1
|
D:HIS249
|
4.1
|
21.7
|
1.0
|
CE1
|
D:TYR95
|
4.1
|
25.3
|
1.0
|
OD2
|
D:ASP63
|
4.2
|
22.2
|
1.0
|
CG
|
D:HIS249
|
4.2
|
21.6
|
1.0
|
NZ
|
D:LYS296
|
4.3
|
23.7
|
1.0
|
NH2
|
D:ARG124
|
4.3
|
38.3
|
0.7
|
CA
|
D:ASP63
|
4.5
|
17.7
|
1.0
|
CB
|
D:SER125
|
4.7
|
19.0
|
1.0
|
NE
|
D:ARG124
|
4.9
|
46.0
|
0.7
|
N
|
D:ALA126
|
4.9
|
20.1
|
1.0
|
CD
|
D:LYS296
|
4.9
|
24.9
|
1.0
|
CD2
|
D:TYR95
|
4.9
|
21.9
|
1.0
|
N
|
D:SER125
|
5.0
|
19.6
|
1.0
|
CD1
|
D:TYR188
|
5.0
|
22.4
|
1.0
|
OG
|
D:SER125
|
5.0
|
21.4
|
1.0
|
|
Iron binding site 3 out
of 4 in 1suv
Go back to
Iron Binding Sites List in 1suv
Iron binding site 3 out
of 4 in the Structure of Human Transferrin Receptor-Transferrin Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Structure of Human Transferrin Receptor-Transferrin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe703
b:32.8
occ:1.00
|
OH
|
E:TYR425
|
1.7
|
25.4
|
1.0
|
OH
|
E:TYR514
|
1.9
|
39.6
|
1.0
|
O1
|
E:CO3701
|
1.9
|
26.0
|
1.0
|
NE2
|
E:HIS582
|
2.1
|
27.8
|
1.0
|
O3
|
E:CO3701
|
2.2
|
27.5
|
1.0
|
C
|
E:CO3701
|
2.3
|
28.3
|
1.0
|
OD1
|
E:ASP392
|
2.4
|
46.0
|
1.0
|
CZ
|
E:TYR425
|
2.8
|
32.0
|
1.0
|
CZ
|
E:TYR514
|
3.0
|
33.5
|
1.0
|
CE1
|
E:HIS582
|
3.0
|
27.7
|
1.0
|
CG
|
E:ASP392
|
3.1
|
37.2
|
1.0
|
CD2
|
E:HIS582
|
3.2
|
27.9
|
1.0
|
CE2
|
E:TYR425
|
3.5
|
36.0
|
1.0
|
O2
|
E:CO3701
|
3.6
|
28.8
|
1.0
|
CE1
|
E:TYR514
|
3.6
|
33.1
|
1.0
|
CB
|
E:ASP392
|
3.7
|
36.1
|
1.0
|
CE1
|
E:TYR425
|
3.9
|
32.9
|
1.0
|
OD2
|
E:ASP392
|
3.9
|
38.0
|
1.0
|
CE2
|
E:TYR514
|
3.9
|
32.6
|
1.0
|
ND1
|
E:HIS582
|
4.1
|
23.4
|
1.0
|
NH1
|
E:ARG629
|
4.2
|
40.6
|
1.0
|
CG
|
E:HIS582
|
4.3
|
29.3
|
1.0
|
CA
|
E:ASP392
|
4.5
|
36.9
|
1.0
|
NH2
|
E:ARG455
|
4.6
|
37.2
|
1.0
|
CB
|
E:THR456
|
4.6
|
35.1
|
1.0
|
OG1
|
E:THR456
|
4.6
|
35.4
|
1.0
|
N
|
E:ALA457
|
4.8
|
37.4
|
1.0
|
CD2
|
E:TYR425
|
4.8
|
38.2
|
1.0
|
N
|
E:THR456
|
4.8
|
33.7
|
1.0
|
NE
|
E:ARG455
|
4.8
|
38.1
|
1.0
|
CD1
|
E:TYR514
|
4.9
|
32.5
|
1.0
|
|
Iron binding site 4 out
of 4 in 1suv
Go back to
Iron Binding Sites List in 1suv
Iron binding site 4 out
of 4 in the Structure of Human Transferrin Receptor-Transferrin Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Structure of Human Transferrin Receptor-Transferrin Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe703
b:32.8
occ:1.00
|
OH
|
F:TYR425
|
1.7
|
25.4
|
1.0
|
OH
|
F:TYR514
|
1.9
|
39.6
|
1.0
|
O1
|
F:CO3701
|
1.9
|
26.0
|
1.0
|
NE2
|
F:HIS582
|
2.1
|
27.8
|
1.0
|
O3
|
F:CO3701
|
2.2
|
27.5
|
1.0
|
C
|
F:CO3701
|
2.3
|
28.3
|
1.0
|
OD1
|
F:ASP392
|
2.4
|
46.0
|
1.0
|
CZ
|
F:TYR425
|
2.8
|
32.0
|
1.0
|
CZ
|
F:TYR514
|
3.0
|
33.5
|
1.0
|
CE1
|
F:HIS582
|
3.0
|
27.7
|
1.0
|
CG
|
F:ASP392
|
3.1
|
37.2
|
1.0
|
CD2
|
F:HIS582
|
3.2
|
27.9
|
1.0
|
CE2
|
F:TYR425
|
3.5
|
36.0
|
1.0
|
O2
|
F:CO3701
|
3.6
|
28.8
|
1.0
|
CE1
|
F:TYR514
|
3.6
|
33.1
|
1.0
|
CB
|
F:ASP392
|
3.7
|
36.1
|
1.0
|
CE1
|
F:TYR425
|
3.9
|
32.9
|
1.0
|
OD2
|
F:ASP392
|
3.9
|
38.0
|
1.0
|
CE2
|
F:TYR514
|
3.9
|
32.6
|
1.0
|
ND1
|
F:HIS582
|
4.1
|
23.4
|
1.0
|
NH1
|
F:ARG629
|
4.2
|
40.6
|
1.0
|
CG
|
F:HIS582
|
4.3
|
29.3
|
1.0
|
CA
|
F:ASP392
|
4.5
|
36.9
|
1.0
|
NH2
|
F:ARG455
|
4.6
|
37.2
|
1.0
|
CB
|
F:THR456
|
4.6
|
35.1
|
1.0
|
OG1
|
F:THR456
|
4.6
|
35.4
|
1.0
|
N
|
F:ALA457
|
4.8
|
37.4
|
1.0
|
CD2
|
F:TYR425
|
4.8
|
38.2
|
1.0
|
N
|
F:THR456
|
4.8
|
33.7
|
1.0
|
NE
|
F:ARG455
|
4.8
|
38.1
|
1.0
|
CD1
|
F:TYR514
|
4.9
|
32.5
|
1.0
|
|
Reference:
Y.Cheng,
O.Zak,
P.Aisen,
S.C.Harrison,
T.Walz.
Structure of the Human Transferrin Receptor-Transferrin Complex Cell(Cambridge,Mass.) V. 116 565 2004.
ISSN: ISSN 0092-8674
PubMed: 14980223
DOI: 10.1016/S0092-8674(04)00130-8
Page generated: Sat Aug 3 15:03:16 2024
|