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Iron in PDB 1t5p: Human Heme Oxygenase Oxidation of Alpha- and Gamma-Meso- Phenylhemes

Enzymatic activity of Human Heme Oxygenase Oxidation of Alpha- and Gamma-Meso- Phenylhemes

All present enzymatic activity of Human Heme Oxygenase Oxidation of Alpha- and Gamma-Meso- Phenylhemes:
1.14.99.3;

Protein crystallography data

The structure of Human Heme Oxygenase Oxidation of Alpha- and Gamma-Meso- Phenylhemes, PDB code: 1t5p was solved by J.Wang, F.Niemevz, L.Lad, G.Buldain, T.L.Poulos, P.R.Ortiz Demontellano, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.11
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 52.914, 64.425, 60.467, 90.00, 90.02, 90.00
R / Rfree (%) 27 / 31

Iron Binding Sites:

The binding sites of Iron atom in the Human Heme Oxygenase Oxidation of Alpha- and Gamma-Meso- Phenylhemes (pdb code 1t5p). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Human Heme Oxygenase Oxidation of Alpha- and Gamma-Meso- Phenylhemes, PDB code: 1t5p:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1t5p

Go back to Iron Binding Sites List in 1t5p
Iron binding site 1 out of 2 in the Human Heme Oxygenase Oxidation of Alpha- and Gamma-Meso- Phenylhemes


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Human Heme Oxygenase Oxidation of Alpha- and Gamma-Meso- Phenylhemes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe300

b:52.6
occ:1.00
FE A:1FH300 0.0 52.6 1.0
NC A:1FH300 1.9 51.7 1.0
NA A:1FH300 2.0 52.7 1.0
NB A:1FH300 2.0 53.0 1.0
ND A:1FH300 2.0 51.4 1.0
NE2 A:HIS25 2.3 55.1 1.0
CE1 A:HIS25 2.9 55.1 1.0
C4C A:1FH300 3.0 51.5 1.0
C4A A:1FH300 3.0 50.1 1.0
C1C A:1FH300 3.1 51.9 1.0
C1B A:1FH300 3.1 51.7 1.0
C1A A:1FH300 3.1 51.3 1.0
C1D A:1FH300 3.1 51.0 1.0
C4D A:1FH300 3.1 51.2 1.0
C4B A:1FH300 3.1 50.1 1.0
CHD A:1FH300 3.4 51.2 1.0
CHB A:1FH300 3.4 51.0 1.0
CHA A:1FH300 3.5 51.7 1.0
CHC A:1FH300 3.5 50.3 1.0
CD2 A:HIS25 3.6 55.4 1.0
ND1 A:HIS25 4.1 55.3 1.0
C3C A:1FH300 4.2 51.8 1.0
C2C A:1FH300 4.3 51.8 1.0
C2B A:1FH300 4.3 50.1 1.0
C3A A:1FH300 4.3 50.4 1.0
C2D A:1FH300 4.4 48.9 1.0
C3D A:1FH300 4.4 48.8 1.0
C3B A:1FH300 4.4 50.1 1.0
C2A A:1FH300 4.4 50.6 1.0
CG A:HIS25 4.5 55.5 1.0
O A:GLY139 4.6 52.6 1.0
CG A:1FH300 4.7 50.9 1.0
CA A:GLY139 4.9 51.6 1.0

Iron binding site 2 out of 2 in 1t5p

Go back to Iron Binding Sites List in 1t5p
Iron binding site 2 out of 2 in the Human Heme Oxygenase Oxidation of Alpha- and Gamma-Meso- Phenylhemes


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Human Heme Oxygenase Oxidation of Alpha- and Gamma-Meso- Phenylhemes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe300

b:50.7
occ:1.00
FE B:1FH300 0.0 50.7 1.0
NC B:1FH300 1.9 50.6 1.0
NA B:1FH300 2.0 50.8 1.0
ND B:1FH300 2.0 50.3 1.0
NB B:1FH300 2.1 50.8 1.0
NE2 B:HIS25 2.4 60.7 1.0
C4C B:1FH300 3.0 50.5 1.0
CE1 B:HIS25 3.0 60.6 1.0
C4A B:1FH300 3.1 51.2 1.0
C1A B:1FH300 3.1 51.3 1.0
C1D B:1FH300 3.1 50.0 1.0
C4D B:1FH300 3.1 50.0 1.0
C1C B:1FH300 3.1 50.9 1.0
C1B B:1FH300 3.1 50.6 1.0
C4B B:1FH300 3.2 51.0 1.0
CHD B:1FH300 3.4 50.1 1.0
CD2 B:HIS25 3.4 60.8 1.0
CHA B:1FH300 3.5 50.6 1.0
CHB B:1FH300 3.5 51.0 1.0
CHC B:1FH300 3.6 51.1 1.0
ND1 B:HIS25 4.2 60.8 1.0
C3C B:1FH300 4.2 50.6 1.0
C2C B:1FH300 4.3 50.6 1.0
C2D B:1FH300 4.3 49.7 1.0
C3D B:1FH300 4.3 49.7 1.0
C3A B:1FH300 4.4 51.6 1.0
C2B B:1FH300 4.4 51.1 1.0
CG B:HIS25 4.4 60.8 1.0
C2A B:1FH300 4.4 51.8 1.0
C3B B:1FH300 4.4 51.1 1.0
O B:GLY139 4.7 53.7 1.0
CG B:1FH300 4.8 51.7 1.0
CA B:GLY139 4.9 52.6 1.0
CD1 B:1FH300 5.0 52.0 1.0

Reference:

J.Wang, F.Niemevz, L.Lad, L.Huang, D.E.Alvarez, G.Buldain, T.L.Poulos, P.R.Ortiz De Montellano. Human Heme Oxygenase Oxidation of 5- and 15-Phenylhemes. J.Biol.Chem. V. 279 42593 2004.
ISSN: ISSN 0021-9258
PubMed: 15297453
DOI: 10.1074/JBC.M406346200
Page generated: Sat Aug 3 15:09:26 2024

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