Iron in PDB 1uc3: Crystal Structure of Hemoglobin I From River Lamprey
Protein crystallography data
The structure of Crystal Structure of Hemoglobin I From River Lamprey, PDB code: 1uc3
was solved by
M.Seki,
M.Yao,
Y.Yazawa,
I.Tanaka,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
10.00 /
2.30
|
|
Space group
|
P 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
59.210,
73.610,
105.870,
103.95,
91.52,
97.64
|
|
R / Rfree (%)
|
19.7 /
25.8
|
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Iron atom in the Crystal Structure of Hemoglobin I From River Lamprey
(pdb code 1uc3). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the
Crystal Structure of Hemoglobin I From River Lamprey, PDB code: 1uc3:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 12 in 1uc3
Go back to
Iron Binding Sites List in 1uc3
Iron binding site 1 out
of 12 in the Crystal Structure of Hemoglobin I From River Lamprey
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Crystal Structure of Hemoglobin I From River Lamprey within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe150
b:36.6
occ:1.00
|
FE
|
A:HEM150
|
0.0
|
36.6
|
1.0
|
|
NC
|
A:HEM150
|
2.0
|
38.2
|
1.0
|
|
NA
|
A:HEM150
|
2.0
|
34.7
|
1.0
|
|
ND
|
A:HEM150
|
2.0
|
37.4
|
1.0
|
|
NB
|
A:HEM150
|
2.0
|
37.9
|
1.0
|
|
NE2
|
A:HIS105
|
2.3
|
70.4
|
1.0
|
|
C1C
|
A:HEM150
|
3.0
|
38.2
|
1.0
|
|
C4C
|
A:HEM150
|
3.0
|
37.3
|
1.0
|
|
C1A
|
A:HEM150
|
3.0
|
33.5
|
1.0
|
|
C4A
|
A:HEM150
|
3.0
|
34.6
|
1.0
|
|
C1D
|
A:HEM150
|
3.1
|
35.6
|
1.0
|
|
C4D
|
A:HEM150
|
3.1
|
34.9
|
1.0
|
|
C4B
|
A:HEM150
|
3.1
|
36.8
|
1.0
|
|
C1B
|
A:HEM150
|
3.1
|
35.7
|
1.0
|
|
CE1
|
A:HIS105
|
3.2
|
62.4
|
1.0
|
|
CHA
|
A:HEM150
|
3.4
|
34.1
|
1.0
|
|
CHC
|
A:HEM150
|
3.4
|
37.5
|
1.0
|
|
CHD
|
A:HEM150
|
3.4
|
35.2
|
1.0
|
|
CHB
|
A:HEM150
|
3.4
|
35.6
|
1.0
|
|
CD2
|
A:HIS105
|
3.5
|
59.4
|
1.0
|
|
NE2
|
A:HIS73
|
4.2
|
40.2
|
1.0
|
|
C2A
|
A:HEM150
|
4.3
|
33.4
|
1.0
|
|
C2C
|
A:HEM150
|
4.3
|
39.4
|
1.0
|
|
C3C
|
A:HEM150
|
4.3
|
39.9
|
1.0
|
|
C3A
|
A:HEM150
|
4.3
|
34.3
|
1.0
|
|
C2D
|
A:HEM150
|
4.3
|
35.6
|
1.0
|
|
C3D
|
A:HEM150
|
4.3
|
35.9
|
1.0
|
|
C2B
|
A:HEM150
|
4.3
|
36.2
|
1.0
|
|
C3B
|
A:HEM150
|
4.3
|
36.5
|
1.0
|
|
CG1
|
A:ILE77
|
4.4
|
40.4
|
1.0
|
|
ND1
|
A:HIS105
|
4.5
|
57.4
|
1.0
|
|
CD1
|
A:ILE77
|
4.5
|
39.4
|
1.0
|
|
CG
|
A:HIS105
|
4.6
|
54.4
|
1.0
|
|
Iron binding site 2 out
of 12 in 1uc3
Go back to
Iron Binding Sites List in 1uc3
Iron binding site 2 out
of 12 in the Crystal Structure of Hemoglobin I From River Lamprey
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Crystal Structure of Hemoglobin I From River Lamprey within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe150
b:27.5
occ:1.00
|
FE
|
B:HEM150
|
0.0
|
27.5
|
1.0
|
|
ND
|
B:HEM150
|
2.0
|
26.3
|
1.0
|
|
NA
|
B:HEM150
|
2.0
|
26.2
|
1.0
|
|
NC
|
B:HEM150
|
2.0
|
23.1
|
1.0
|
|
NB
|
B:HEM150
|
2.0
|
25.7
|
1.0
|
|
NE2
|
B:HIS105
|
2.4
|
68.0
|
1.0
|
|
C4D
|
B:HEM150
|
3.0
|
25.4
|
1.0
|
|
C1D
|
B:HEM150
|
3.0
|
25.6
|
1.0
|
|
C4A
|
B:HEM150
|
3.0
|
26.6
|
1.0
|
|
C1A
|
B:HEM150
|
3.0
|
26.6
|
1.0
|
|
C4C
|
B:HEM150
|
3.1
|
24.3
|
1.0
|
|
C1C
|
B:HEM150
|
3.1
|
25.2
|
1.0
|
|
C1B
|
B:HEM150
|
3.1
|
23.3
|
1.0
|
|
C4B
|
B:HEM150
|
3.1
|
24.0
|
1.0
|
|
CE1
|
B:HIS105
|
3.3
|
57.1
|
1.0
|
|
CHA
|
B:HEM150
|
3.4
|
25.2
|
1.0
|
|
CHD
|
B:HEM150
|
3.4
|
24.9
|
1.0
|
|
CHB
|
B:HEM150
|
3.4
|
25.9
|
1.0
|
|
CD2
|
B:HIS105
|
3.4
|
53.9
|
1.0
|
|
CHC
|
B:HEM150
|
3.5
|
25.2
|
1.0
|
|
NE2
|
B:HIS73
|
4.2
|
40.5
|
1.0
|
|
C3D
|
B:HEM150
|
4.2
|
26.6
|
1.0
|
|
C2D
|
B:HEM150
|
4.2
|
27.5
|
1.0
|
|
C3A
|
B:HEM150
|
4.3
|
25.6
|
1.0
|
|
C2A
|
B:HEM150
|
4.3
|
25.4
|
1.0
|
|
C2C
|
B:HEM150
|
4.3
|
23.5
|
1.0
|
|
C2B
|
B:HEM150
|
4.3
|
24.6
|
1.0
|
|
C3C
|
B:HEM150
|
4.3
|
24.1
|
1.0
|
|
C3B
|
B:HEM150
|
4.3
|
25.0
|
1.0
|
|
CG1
|
B:ILE77
|
4.5
|
29.6
|
1.0
|
|
ND1
|
B:HIS105
|
4.6
|
51.0
|
1.0
|
|
CG
|
B:HIS105
|
4.6
|
47.5
|
1.0
|
|
CD1
|
B:ILE77
|
4.7
|
31.7
|
1.0
|
|
Iron binding site 3 out
of 12 in 1uc3
Go back to
Iron Binding Sites List in 1uc3
Iron binding site 3 out
of 12 in the Crystal Structure of Hemoglobin I From River Lamprey
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Crystal Structure of Hemoglobin I From River Lamprey within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe150
b:22.3
occ:1.00
|
FE
|
C:HEM150
|
0.0
|
22.3
|
1.0
|
|
NA
|
C:HEM150
|
2.0
|
20.8
|
1.0
|
|
ND
|
C:HEM150
|
2.0
|
22.8
|
1.0
|
|
NC
|
C:HEM150
|
2.0
|
20.9
|
1.0
|
|
NB
|
C:HEM150
|
2.0
|
20.8
|
1.0
|
|
NE2
|
C:HIS105
|
2.5
|
61.5
|
1.0
|
|
C1A
|
C:HEM150
|
3.0
|
19.0
|
1.0
|
|
C4D
|
C:HEM150
|
3.0
|
21.4
|
1.0
|
|
C1C
|
C:HEM150
|
3.1
|
19.7
|
1.0
|
|
C4A
|
C:HEM150
|
3.1
|
19.6
|
1.0
|
|
C1D
|
C:HEM150
|
3.1
|
21.5
|
1.0
|
|
C4C
|
C:HEM150
|
3.1
|
20.5
|
1.0
|
|
C4B
|
C:HEM150
|
3.1
|
20.6
|
1.0
|
|
C1B
|
C:HEM150
|
3.1
|
21.3
|
1.0
|
|
CE1
|
C:HIS105
|
3.3
|
50.3
|
1.0
|
|
CHA
|
C:HEM150
|
3.4
|
19.2
|
1.0
|
|
CHC
|
C:HEM150
|
3.4
|
20.0
|
1.0
|
|
CHD
|
C:HEM150
|
3.5
|
20.2
|
1.0
|
|
CHB
|
C:HEM150
|
3.5
|
18.2
|
1.0
|
|
CD2
|
C:HIS105
|
3.6
|
47.0
|
1.0
|
|
NE2
|
C:HIS73
|
4.1
|
23.0
|
1.0
|
|
C2A
|
C:HEM150
|
4.2
|
19.4
|
1.0
|
|
C3D
|
C:HEM150
|
4.3
|
23.9
|
1.0
|
|
C2C
|
C:HEM150
|
4.3
|
21.5
|
1.0
|
|
C3A
|
C:HEM150
|
4.3
|
19.2
|
1.0
|
|
C2D
|
C:HEM150
|
4.3
|
22.2
|
1.0
|
|
C3C
|
C:HEM150
|
4.3
|
22.5
|
1.0
|
|
C2B
|
C:HEM150
|
4.4
|
19.8
|
1.0
|
|
C3B
|
C:HEM150
|
4.4
|
19.6
|
1.0
|
|
CG1
|
C:ILE77
|
4.4
|
18.2
|
1.0
|
|
CD1
|
C:ILE77
|
4.5
|
19.4
|
1.0
|
|
ND1
|
C:HIS105
|
4.5
|
45.6
|
1.0
|
|
CG
|
C:HIS105
|
4.7
|
41.5
|
1.0
|
|
Iron binding site 4 out
of 12 in 1uc3
Go back to
Iron Binding Sites List in 1uc3
Iron binding site 4 out
of 12 in the Crystal Structure of Hemoglobin I From River Lamprey
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Crystal Structure of Hemoglobin I From River Lamprey within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe150
b:19.8
occ:1.00
|
FE
|
D:HEM150
|
0.0
|
19.8
|
1.0
|
|
ND
|
D:HEM150
|
1.9
|
19.1
|
1.0
|
|
NA
|
D:HEM150
|
2.0
|
17.2
|
1.0
|
|
NB
|
D:HEM150
|
2.0
|
14.4
|
1.0
|
|
NC
|
D:HEM150
|
2.0
|
18.9
|
1.0
|
|
NE2
|
D:HIS105
|
2.5
|
65.8
|
1.0
|
|
C4D
|
D:HEM150
|
3.0
|
17.9
|
1.0
|
|
C1D
|
D:HEM150
|
3.0
|
19.4
|
1.0
|
|
C1A
|
D:HEM150
|
3.0
|
14.4
|
1.0
|
|
C4B
|
D:HEM150
|
3.1
|
16.1
|
1.0
|
|
C4A
|
D:HEM150
|
3.1
|
14.9
|
1.0
|
|
C1C
|
D:HEM150
|
3.1
|
15.9
|
1.0
|
|
C4C
|
D:HEM150
|
3.1
|
18.3
|
1.0
|
|
C1B
|
D:HEM150
|
3.1
|
14.8
|
1.0
|
|
CHA
|
D:HEM150
|
3.4
|
17.3
|
1.0
|
|
CE1
|
D:HIS105
|
3.4
|
57.1
|
1.0
|
|
CHC
|
D:HEM150
|
3.4
|
16.1
|
1.0
|
|
CHD
|
D:HEM150
|
3.4
|
18.6
|
1.0
|
|
CD2
|
D:HIS105
|
3.5
|
53.3
|
1.0
|
|
CHB
|
D:HEM150
|
3.5
|
11.9
|
1.0
|
|
C3D
|
D:HEM150
|
4.2
|
19.8
|
1.0
|
|
C2D
|
D:HEM150
|
4.2
|
19.2
|
1.0
|
|
C2A
|
D:HEM150
|
4.3
|
16.1
|
1.0
|
|
C3A
|
D:HEM150
|
4.3
|
13.6
|
1.0
|
|
NE2
|
D:HIS73
|
4.3
|
23.0
|
1.0
|
|
C3B
|
D:HEM150
|
4.3
|
14.4
|
1.0
|
|
C2C
|
D:HEM150
|
4.3
|
19.5
|
1.0
|
|
CG1
|
D:ILE77
|
4.3
|
20.9
|
1.0
|
|
C3C
|
D:HEM150
|
4.3
|
19.1
|
1.0
|
|
C2B
|
D:HEM150
|
4.4
|
14.1
|
1.0
|
|
CD1
|
D:ILE77
|
4.4
|
20.6
|
1.0
|
|
CG
|
D:HIS105
|
4.6
|
47.2
|
1.0
|
|
ND1
|
D:HIS105
|
4.6
|
52.8
|
1.0
|
|
Iron binding site 5 out
of 12 in 1uc3
Go back to
Iron Binding Sites List in 1uc3
Iron binding site 5 out
of 12 in the Crystal Structure of Hemoglobin I From River Lamprey
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Crystal Structure of Hemoglobin I From River Lamprey within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe150
b:20.4
occ:1.00
|
FE
|
E:HEM150
|
0.0
|
20.4
|
1.0
|
|
ND
|
E:HEM150
|
2.0
|
18.1
|
1.0
|
|
NA
|
E:HEM150
|
2.0
|
17.0
|
1.0
|
|
NC
|
E:HEM150
|
2.0
|
17.4
|
1.0
|
|
NB
|
E:HEM150
|
2.0
|
15.2
|
1.0
|
|
NE2
|
E:HIS105
|
2.5
|
62.9
|
1.0
|
|
C4D
|
E:HEM150
|
3.0
|
19.2
|
1.0
|
|
C1D
|
E:HEM150
|
3.0
|
16.7
|
1.0
|
|
C1A
|
E:HEM150
|
3.0
|
17.6
|
1.0
|
|
C4A
|
E:HEM150
|
3.1
|
16.1
|
1.0
|
|
C4B
|
E:HEM150
|
3.1
|
18.0
|
1.0
|
|
C1C
|
E:HEM150
|
3.1
|
18.3
|
1.0
|
|
C1B
|
E:HEM150
|
3.1
|
14.6
|
1.0
|
|
C4C
|
E:HEM150
|
3.1
|
18.7
|
1.0
|
|
CE1
|
E:HIS105
|
3.3
|
48.7
|
1.0
|
|
CHA
|
E:HEM150
|
3.4
|
18.2
|
1.0
|
|
CHD
|
E:HEM150
|
3.4
|
16.7
|
1.0
|
|
CHC
|
E:HEM150
|
3.4
|
19.3
|
1.0
|
|
CHB
|
E:HEM150
|
3.5
|
14.0
|
1.0
|
|
CD2
|
E:HIS105
|
3.7
|
45.6
|
1.0
|
|
NE2
|
E:HIS73
|
4.0
|
28.7
|
1.0
|
|
C3D
|
E:HEM150
|
4.2
|
19.8
|
1.0
|
|
C2D
|
E:HEM150
|
4.3
|
19.6
|
1.0
|
|
C3A
|
E:HEM150
|
4.3
|
14.1
|
1.0
|
|
C2A
|
E:HEM150
|
4.3
|
16.4
|
1.0
|
|
C2B
|
E:HEM150
|
4.3
|
15.5
|
1.0
|
|
C2C
|
E:HEM150
|
4.3
|
17.2
|
1.0
|
|
C3B
|
E:HEM150
|
4.3
|
15.9
|
1.0
|
|
C3C
|
E:HEM150
|
4.3
|
18.3
|
1.0
|
|
ND1
|
E:HIS105
|
4.5
|
43.6
|
1.0
|
|
CG1
|
E:ILE77
|
4.6
|
24.8
|
1.0
|
|
CD1
|
E:ILE77
|
4.6
|
22.4
|
1.0
|
|
CG
|
E:HIS105
|
4.7
|
39.1
|
1.0
|
|
CD2
|
E:HIS73
|
4.9
|
27.2
|
1.0
|
|
CE1
|
E:HIS73
|
4.9
|
28.2
|
1.0
|
|
Iron binding site 6 out
of 12 in 1uc3
Go back to
Iron Binding Sites List in 1uc3
Iron binding site 6 out
of 12 in the Crystal Structure of Hemoglobin I From River Lamprey
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Crystal Structure of Hemoglobin I From River Lamprey within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe150
b:23.3
occ:1.00
|
FE
|
F:HEM150
|
0.0
|
23.3
|
1.0
|
|
NA
|
F:HEM150
|
2.0
|
21.5
|
1.0
|
|
NB
|
F:HEM150
|
2.0
|
20.6
|
1.0
|
|
NC
|
F:HEM150
|
2.0
|
21.2
|
1.0
|
|
ND
|
F:HEM150
|
2.0
|
22.2
|
1.0
|
|
NE2
|
F:HIS105
|
2.4
|
64.3
|
1.0
|
|
C1A
|
F:HEM150
|
3.0
|
20.2
|
1.0
|
|
C4A
|
F:HEM150
|
3.0
|
22.2
|
1.0
|
|
C1C
|
F:HEM150
|
3.0
|
20.2
|
1.0
|
|
C4B
|
F:HEM150
|
3.0
|
20.2
|
1.0
|
|
C1B
|
F:HEM150
|
3.0
|
20.9
|
1.0
|
|
C4D
|
F:HEM150
|
3.1
|
19.0
|
1.0
|
|
C1D
|
F:HEM150
|
3.1
|
22.0
|
1.0
|
|
C4C
|
F:HEM150
|
3.1
|
19.8
|
1.0
|
|
CE1
|
F:HIS105
|
3.2
|
51.6
|
1.0
|
|
CHC
|
F:HEM150
|
3.4
|
19.2
|
1.0
|
|
CHA
|
F:HEM150
|
3.4
|
19.2
|
1.0
|
|
CHB
|
F:HEM150
|
3.4
|
21.4
|
1.0
|
|
CHD
|
F:HEM150
|
3.5
|
19.9
|
1.0
|
|
CD2
|
F:HIS105
|
3.5
|
50.2
|
1.0
|
|
NE2
|
F:HIS73
|
4.0
|
25.7
|
1.0
|
|
CG1
|
F:ILE77
|
4.2
|
19.7
|
1.0
|
|
CD1
|
F:ILE77
|
4.2
|
21.2
|
1.0
|
|
C2A
|
F:HEM150
|
4.2
|
20.8
|
1.0
|
|
C3A
|
F:HEM150
|
4.3
|
22.0
|
1.0
|
|
C2B
|
F:HEM150
|
4.3
|
19.3
|
1.0
|
|
C2C
|
F:HEM150
|
4.3
|
20.4
|
1.0
|
|
C3B
|
F:HEM150
|
4.3
|
20.4
|
1.0
|
|
C3D
|
F:HEM150
|
4.3
|
21.3
|
1.0
|
|
C2D
|
F:HEM150
|
4.3
|
19.7
|
1.0
|
|
C3C
|
F:HEM150
|
4.3
|
19.6
|
1.0
|
|
ND1
|
F:HIS105
|
4.5
|
43.9
|
1.0
|
|
CG
|
F:HIS105
|
4.6
|
44.2
|
1.0
|
|
CD2
|
F:HIS73
|
4.9
|
25.7
|
1.0
|
|
Iron binding site 7 out
of 12 in 1uc3
Go back to
Iron Binding Sites List in 1uc3
Iron binding site 7 out
of 12 in the Crystal Structure of Hemoglobin I From River Lamprey
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Crystal Structure of Hemoglobin I From River Lamprey within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Fe150
b:22.4
occ:1.00
|
FE
|
G:HEM150
|
0.0
|
22.4
|
1.0
|
|
ND
|
G:HEM150
|
2.0
|
19.5
|
1.0
|
|
NC
|
G:HEM150
|
2.0
|
21.7
|
1.0
|
|
NB
|
G:HEM150
|
2.0
|
22.6
|
1.0
|
|
NA
|
G:HEM150
|
2.0
|
21.2
|
1.0
|
|
NE2
|
G:HIS105
|
2.4
|
67.1
|
1.0
|
|
C4D
|
G:HEM150
|
3.0
|
19.9
|
1.0
|
|
C1D
|
G:HEM150
|
3.0
|
19.7
|
1.0
|
|
C1C
|
G:HEM150
|
3.0
|
19.5
|
1.0
|
|
C1A
|
G:HEM150
|
3.1
|
19.6
|
1.0
|
|
C4B
|
G:HEM150
|
3.1
|
23.7
|
1.0
|
|
C4C
|
G:HEM150
|
3.1
|
21.2
|
1.0
|
|
C4A
|
G:HEM150
|
3.1
|
21.2
|
1.0
|
|
C1B
|
G:HEM150
|
3.1
|
22.9
|
1.0
|
|
CE1
|
G:HIS105
|
3.3
|
55.8
|
1.0
|
|
CHC
|
G:HEM150
|
3.4
|
22.7
|
1.0
|
|
CHA
|
G:HEM150
|
3.4
|
18.5
|
1.0
|
|
CHD
|
G:HEM150
|
3.4
|
20.2
|
1.0
|
|
CHB
|
G:HEM150
|
3.5
|
22.5
|
1.0
|
|
CD2
|
G:HIS105
|
3.5
|
51.4
|
1.0
|
|
NE2
|
G:HIS73
|
4.2
|
27.8
|
1.0
|
|
C3D
|
G:HEM150
|
4.2
|
19.4
|
1.0
|
|
C2D
|
G:HEM150
|
4.2
|
18.5
|
1.0
|
|
C2C
|
G:HEM150
|
4.3
|
21.5
|
1.0
|
|
C2A
|
G:HEM150
|
4.3
|
21.7
|
1.0
|
|
C3A
|
G:HEM150
|
4.3
|
21.8
|
1.0
|
|
C3C
|
G:HEM150
|
4.3
|
20.7
|
1.0
|
|
C3B
|
G:HEM150
|
4.3
|
22.9
|
1.0
|
|
C2B
|
G:HEM150
|
4.3
|
21.8
|
1.0
|
|
CG1
|
G:ILE77
|
4.3
|
28.6
|
1.0
|
|
CD1
|
G:ILE77
|
4.4
|
34.5
|
1.0
|
|
ND1
|
G:HIS105
|
4.6
|
49.0
|
1.0
|
|
CG
|
G:HIS105
|
4.6
|
45.4
|
1.0
|
|
Iron binding site 8 out
of 12 in 1uc3
Go back to
Iron Binding Sites List in 1uc3
Iron binding site 8 out
of 12 in the Crystal Structure of Hemoglobin I From River Lamprey
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Crystal Structure of Hemoglobin I From River Lamprey within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Fe150
b:22.1
occ:1.00
|
FE
|
H:HEM150
|
0.0
|
22.1
|
1.0
|
|
NA
|
H:HEM150
|
2.0
|
20.5
|
1.0
|
|
NB
|
H:HEM150
|
2.0
|
19.9
|
1.0
|
|
ND
|
H:HEM150
|
2.0
|
23.4
|
1.0
|
|
NC
|
H:HEM150
|
2.0
|
23.1
|
1.0
|
|
NE2
|
H:HIS105
|
2.4
|
64.3
|
1.0
|
|
C4B
|
H:HEM150
|
3.0
|
20.5
|
1.0
|
|
C1A
|
H:HEM150
|
3.0
|
20.0
|
1.0
|
|
C4A
|
H:HEM150
|
3.1
|
19.6
|
1.0
|
|
C1C
|
H:HEM150
|
3.1
|
22.1
|
1.0
|
|
C4D
|
H:HEM150
|
3.1
|
24.0
|
1.0
|
|
C1D
|
H:HEM150
|
3.1
|
24.3
|
1.0
|
|
C1B
|
H:HEM150
|
3.1
|
18.7
|
1.0
|
|
C4C
|
H:HEM150
|
3.1
|
21.6
|
1.0
|
|
CE1
|
H:HIS105
|
3.3
|
54.7
|
1.0
|
|
CHC
|
H:HEM150
|
3.4
|
22.4
|
1.0
|
|
CHA
|
H:HEM150
|
3.4
|
21.4
|
1.0
|
|
CHB
|
H:HEM150
|
3.5
|
17.6
|
1.0
|
|
CHD
|
H:HEM150
|
3.5
|
23.8
|
1.0
|
|
CD2
|
H:HIS105
|
3.5
|
51.8
|
1.0
|
|
CE1
|
H:HIS73
|
4.0
|
20.4
|
1.0
|
|
C3D
|
H:HEM150
|
4.3
|
24.7
|
1.0
|
|
C2A
|
H:HEM150
|
4.3
|
20.9
|
1.0
|
|
C2B
|
H:HEM150
|
4.3
|
19.8
|
1.0
|
|
C2C
|
H:HEM150
|
4.3
|
21.8
|
1.0
|
|
C3B
|
H:HEM150
|
4.3
|
19.6
|
1.0
|
|
C3A
|
H:HEM150
|
4.3
|
19.8
|
1.0
|
|
C2D
|
H:HEM150
|
4.3
|
24.6
|
1.0
|
|
C3C
|
H:HEM150
|
4.3
|
23.6
|
1.0
|
|
CG1
|
H:ILE77
|
4.5
|
18.2
|
1.0
|
|
ND1
|
H:HIS105
|
4.6
|
50.2
|
1.0
|
|
CG
|
H:HIS105
|
4.6
|
46.6
|
1.0
|
|
NE2
|
H:HIS73
|
4.7
|
21.2
|
1.0
|
|
CD1
|
H:ILE77
|
4.7
|
19.8
|
1.0
|
|
Iron binding site 9 out
of 12 in 1uc3
Go back to
Iron Binding Sites List in 1uc3
Iron binding site 9 out
of 12 in the Crystal Structure of Hemoglobin I From River Lamprey
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Crystal Structure of Hemoglobin I From River Lamprey within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Fe150
b:15.7
occ:1.00
|
FE
|
I:HEM150
|
0.0
|
15.7
|
1.0
|
|
NA
|
I:HEM150
|
2.0
|
14.6
|
1.0
|
|
ND
|
I:HEM150
|
2.0
|
17.1
|
1.0
|
|
NC
|
I:HEM150
|
2.0
|
16.5
|
1.0
|
|
NB
|
I:HEM150
|
2.0
|
14.8
|
1.0
|
|
NE2
|
I:HIS105
|
2.3
|
65.6
|
1.0
|
|
C1A
|
I:HEM150
|
3.0
|
13.7
|
1.0
|
|
C1C
|
I:HEM150
|
3.0
|
16.2
|
1.0
|
|
C4B
|
I:HEM150
|
3.0
|
15.9
|
1.0
|
|
C4A
|
I:HEM150
|
3.0
|
12.8
|
1.0
|
|
C4D
|
I:HEM150
|
3.1
|
15.7
|
1.0
|
|
C1D
|
I:HEM150
|
3.1
|
15.7
|
1.0
|
|
C4C
|
I:HEM150
|
3.1
|
15.3
|
1.0
|
|
C1B
|
I:HEM150
|
3.1
|
14.8
|
1.0
|
|
CE1
|
I:HIS105
|
3.3
|
54.5
|
1.0
|
|
CD2
|
I:HIS105
|
3.4
|
50.7
|
1.0
|
|
CHA
|
I:HEM150
|
3.4
|
14.7
|
1.0
|
|
CHC
|
I:HEM150
|
3.4
|
16.5
|
1.0
|
|
CHD
|
I:HEM150
|
3.4
|
15.8
|
1.0
|
|
CHB
|
I:HEM150
|
3.5
|
13.1
|
1.0
|
|
NE2
|
I:HIS73
|
4.0
|
29.3
|
1.0
|
|
C2A
|
I:HEM150
|
4.2
|
16.0
|
1.0
|
|
C3A
|
I:HEM150
|
4.3
|
15.6
|
1.0
|
|
C2D
|
I:HEM150
|
4.3
|
17.1
|
1.0
|
|
C2C
|
I:HEM150
|
4.3
|
16.9
|
1.0
|
|
C3D
|
I:HEM150
|
4.3
|
16.0
|
1.0
|
|
C3B
|
I:HEM150
|
4.3
|
16.2
|
1.0
|
|
C2B
|
I:HEM150
|
4.3
|
13.3
|
1.0
|
|
C3C
|
I:HEM150
|
4.3
|
16.8
|
1.0
|
|
CG1
|
I:ILE77
|
4.4
|
17.0
|
1.0
|
|
CG
|
I:HIS105
|
4.5
|
45.5
|
1.0
|
|
ND1
|
I:HIS105
|
4.5
|
48.7
|
1.0
|
|
CD1
|
I:ILE77
|
4.7
|
20.4
|
1.0
|
|
CD2
|
I:HIS73
|
4.9
|
27.5
|
1.0
|
|
CE1
|
I:HIS73
|
4.9
|
26.5
|
1.0
|
|
Iron binding site 10 out
of 12 in 1uc3
Go back to
Iron Binding Sites List in 1uc3
Iron binding site 10 out
of 12 in the Crystal Structure of Hemoglobin I From River Lamprey
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Crystal Structure of Hemoglobin I From River Lamprey within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Fe150
b:20.6
occ:1.00
|
FE
|
J:HEM150
|
0.0
|
20.6
|
1.0
|
|
NC
|
J:HEM150
|
2.0
|
22.2
|
1.0
|
|
ND
|
J:HEM150
|
2.0
|
22.6
|
1.0
|
|
NB
|
J:HEM150
|
2.0
|
20.7
|
1.0
|
|
NA
|
J:HEM150
|
2.0
|
21.5
|
1.0
|
|
NE2
|
J:HIS105
|
2.5
|
64.6
|
1.0
|
|
C1C
|
J:HEM150
|
3.0
|
23.4
|
1.0
|
|
C4C
|
J:HEM150
|
3.0
|
22.5
|
1.0
|
|
C1D
|
J:HEM150
|
3.1
|
22.6
|
1.0
|
|
C4B
|
J:HEM150
|
3.1
|
19.3
|
1.0
|
|
C4D
|
J:HEM150
|
3.1
|
20.3
|
1.0
|
|
C1B
|
J:HEM150
|
3.1
|
20.4
|
1.0
|
|
C1A
|
J:HEM150
|
3.1
|
19.7
|
1.0
|
|
C4A
|
J:HEM150
|
3.1
|
20.4
|
1.0
|
|
CHC
|
J:HEM150
|
3.4
|
21.1
|
1.0
|
|
CHD
|
J:HEM150
|
3.4
|
21.8
|
1.0
|
|
CE1
|
J:HIS105
|
3.4
|
53.5
|
1.0
|
|
CD2
|
J:HIS105
|
3.5
|
50.5
|
1.0
|
|
CHA
|
J:HEM150
|
3.5
|
19.9
|
1.0
|
|
CHB
|
J:HEM150
|
3.5
|
18.4
|
1.0
|
|
NE2
|
J:HIS73
|
4.2
|
32.0
|
1.0
|
|
C2C
|
J:HEM150
|
4.3
|
22.1
|
1.0
|
|
C3C
|
J:HEM150
|
4.3
|
22.4
|
1.0
|
|
C2D
|
J:HEM150
|
4.3
|
24.3
|
1.0
|
|
C2B
|
J:HEM150
|
4.3
|
19.1
|
1.0
|
|
C3B
|
J:HEM150
|
4.3
|
20.0
|
1.0
|
|
C3D
|
J:HEM150
|
4.3
|
21.5
|
1.0
|
|
C2A
|
J:HEM150
|
4.3
|
19.3
|
1.0
|
|
C3A
|
J:HEM150
|
4.3
|
19.9
|
1.0
|
|
CG1
|
J:ILE77
|
4.4
|
17.8
|
1.0
|
|
CD1
|
J:ILE77
|
4.6
|
14.8
|
1.0
|
|
ND1
|
J:HIS105
|
4.6
|
48.6
|
1.0
|
|
CG
|
J:HIS105
|
4.6
|
44.8
|
1.0
|
|
Reference:
M.Seki,
M.Yao,
Y.Yazawa,
I.Tanaka.
Crystal Structure Analysis of River Lamprey Hemoglobin I To Be Published.
Page generated: Sat Aug 3 15:36:30 2024
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