Iron in PDB 1vei: Mycobacterium Smegmatis Dps

The structure of Mycobacterium Smegmatis Dps, PDB code: 1vei was solved by S.Roy, S.Gupta, S.Das, K.Sekar, D.Chatterji, M.Vijayan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.45 / 2.85
Space group	F 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	179.965, 179.965, 179.965, 90.00, 90.00, 90.00
R / Rfree (%)	19.8 / 25

The binding sites of Iron atom in the Mycobacterium Smegmatis Dps (pdb code 1vei). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Mycobacterium Smegmatis Dps, PDB code: 1vei:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Mycobacterium Smegmatis Dps


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Mycobacterium Smegmatis Dps within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe184 b:64.7 occ:0.40 OD1 A:ASP66 2.4 56.6 1.0 OE2 A:GLU70 2.6 51.7 1.0 OD2 A:ASP66 2.8 56.6 1.0 CG A:ASP66 3.0 56.6 1.0 O A:HOH205 3.5 54.4 1.0 CD A:GLU70 3.6 51.7 1.0 OE1 A:GLU70 4.3 51.7 1.0 CB A:ASP66 4.4 56.6 1.0 CG A:GLU70 4.5 51.7 1.0

Iron binding site 2 out of 2 in the Mycobacterium Smegmatis Dps


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Mycobacterium Smegmatis Dps within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe185 b:58.7 occ:0.40 OD2 A:ASP66 3.4 56.6 1.0 CB A:ASP66 4.1 56.6 1.0 CG A:ASP66 4.1 56.6 1.0 O A:HOH204 4.2 50.4 1.0 O A:ARG62 4.2 35.3 1.0 CA A:GLY63 4.4 34.8 1.0 C A:ARG62 4.5 35.3 1.0 N A:GLY63 4.6 34.8 1.0 CB A:ARG62 5.0 37.9 1.0

S.Roy, S.Gupta, S.Das, K.Sekar, D.Chatterji, M.Vijayan. X-Ray Analysis of Mycobacterium Smegmatis Dps and A Comparative Study Involving Other Dps and Dps-Like Molecules J.Mol.Biol. V. 339 1103 2004.
ISSN: ISSN 0022-2836
PubMed: 15178251
DOI: 10.1016/J.JMB.2004.04.042