Iron in PDB 1wov: Crystal Structure of Heme Oxygenase-2 From Synechocystis Sp. Pcc 6803 in Complex with Heme

All present enzymatic activity of Crystal Structure of Heme Oxygenase-2 From Synechocystis Sp. Pcc 6803 in Complex with Heme:
1.14.99.3;

The structure of Crystal Structure of Heme Oxygenase-2 From Synechocystis Sp. Pcc 6803 in Complex with Heme, PDB code: 1wov was solved by M.Sugishima, Y.Hagiwara, X.Zhang, T.Yoshida, C.T.Migita, K.Fukuyama, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.76 / 1.75
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	58.163, 74.585, 72.661, 90.00, 108.15, 90.00
R / Rfree (%)	19.3 / 25.4

The binding sites of Iron atom in the Crystal Structure of Heme Oxygenase-2 From Synechocystis Sp. Pcc 6803 in Complex with Heme (pdb code 1wov). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of Heme Oxygenase-2 From Synechocystis Sp. Pcc 6803 in Complex with Heme, PDB code: 1wov:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of Heme Oxygenase-2 From Synechocystis Sp. Pcc 6803 in Complex with Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Heme Oxygenase-2 From Synechocystis Sp. Pcc 6803 in Complex with Heme within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe300 b:15.3 occ:1.00 FE A:HEM300 0.0 15.3 1.0 NE2 A:HIS16 1.9 10.8 1.0 NB A:HEM300 2.0 13.7 1.0 NA A:HEM300 2.0 16.2 1.0 NC A:HEM300 2.0 16.0 1.0 ND A:HEM300 2.0 18.0 1.0 O A:HOH594 2.1 18.3 1.0 CE1 A:HIS16 2.9 16.9 1.0 CD2 A:HIS16 3.0 16.9 1.0 C4A A:HEM300 3.0 13.3 1.0 C1D A:HEM300 3.0 16.3 1.0 C4B A:HEM300 3.0 14.5 1.0 C1B A:HEM300 3.0 14.3 1.0 C1C A:HEM300 3.1 15.1 1.0 C4C A:HEM300 3.1 17.6 1.0 C1A A:HEM300 3.1 19.0 1.0 C4D A:HEM300 3.1 14.6 1.0 CHC A:HEM300 3.4 13.6 1.0 CHB A:HEM300 3.4 15.9 1.0 CHD A:HEM300 3.4 13.7 1.0 CHA A:HEM300 3.5 21.3 1.0 O A:HOH362 4.0 26.4 1.0 ND1 A:HIS16 4.0 15.0 1.0 CG A:HIS16 4.1 12.9 1.0 C3B A:HEM300 4.2 14.1 1.0 C2B A:HEM300 4.2 16.4 1.0 C3A A:HEM300 4.2 16.7 1.0 C2C A:HEM300 4.3 14.6 1.0 C2D A:HEM300 4.3 15.5 1.0 C2A A:HEM300 4.3 13.7 1.0 N A:GLY133 4.3 21.8 1.0 C3C A:HEM300 4.3 17.2 1.0 C3D A:HEM300 4.3 15.3 1.0 CA A:GLY133 4.5 22.5 1.0 CA A:GLY129 4.7 17.0 1.0 CB A:SER132 4.9 21.8 1.0

Iron binding site 2 out of 2 in the Crystal Structure of Heme Oxygenase-2 From Synechocystis Sp. Pcc 6803 in Complex with Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Heme Oxygenase-2 From Synechocystis Sp. Pcc 6803 in Complex with Heme within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe300 b:15.2 occ:1.00 FE B:HEM300 0.0 15.2 1.0 O B:HOH585 1.9 21.4 1.0 NB B:HEM300 2.0 14.3 1.0 ND B:HEM300 2.0 14.8 1.0 NA B:HEM300 2.0 15.7 1.0 NE2 B:HIS16 2.0 14.1 1.0 NC B:HEM300 2.0 16.0 1.0 CD2 B:HIS16 3.0 16.2 1.0 C1D B:HEM300 3.0 13.7 1.0 C4C B:HEM300 3.0 16.9 1.0 C1B B:HEM300 3.0 16.8 1.0 C4B B:HEM300 3.0 16.3 1.0 CE1 B:HIS16 3.0 37.5 1.0 C1A B:HEM300 3.1 19.3 1.0 C4D B:HEM300 3.1 16.8 1.0 C1C B:HEM300 3.1 18.0 1.0 C4A B:HEM300 3.1 12.7 1.0 CHD B:HEM300 3.4 16.4 1.0 CHA B:HEM300 3.4 21.7 1.0 CHC B:HEM300 3.4 18.4 1.0 CHB B:HEM300 3.4 17.2 1.0 ND1 B:HIS16 4.1 17.3 1.0 CG B:HIS16 4.1 15.7 1.0 N B:GLY133 4.2 18.2 1.0 C2B B:HEM300 4.2 18.8 1.0 C3B B:HEM300 4.2 17.4 1.0 O B:HOH376 4.3 38.9 1.0 C2A B:HEM300 4.3 16.8 1.0 C3C B:HEM300 4.3 15.4 1.0 C2D B:HEM300 4.3 16.1 1.0 C3A B:HEM300 4.3 16.3 1.0 C2C B:HEM300 4.3 16.6 1.0 C3D B:HEM300 4.3 15.4 1.0 CA B:GLY133 4.5 20.6 1.0 CA B:GLY129 4.7 16.9 1.0 CB B:SER132 4.8 16.9 1.0

M.Sugishima, Y.Hagiwara, X.Zhang, T.Yoshida, C.T.Migita, K.Fukuyama. Crystal Structure of Dimeric Heme Oxygenase-2 From Synechocystis Sp. Pcc 6803 in Complex with Heme. Biochemistry V. 44 4257 2005.
ISSN: ISSN 0006-2960
PubMed: 15766254
DOI: 10.1021/BI0480483