Atomistry » Iron » PDB 1wa6-1x71 » 1wzg
Atomistry »
  Iron »
    PDB 1wa6-1x71 »
      1wzg »

Iron in PDB 1wzg: Crystal Structure of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme Oxygenase

Enzymatic activity of Crystal Structure of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme Oxygenase

All present enzymatic activity of Crystal Structure of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme Oxygenase:
1.14.99.3;

Protein crystallography data

The structure of Crystal Structure of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme Oxygenase, PDB code: 1wzg was solved by M.Unno, N.Yokoi, T.Ueno, Y.Watanabe, M.Ikeda-Saito, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.75
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 41.471, 62.884, 77.991, 90.00, 98.89, 90.00
R / Rfree (%) 17.1 / 21.5

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme Oxygenase (pdb code 1wzg). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme Oxygenase, PDB code: 1wzg:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1wzg

Go back to Iron Binding Sites List in 1wzg
Iron binding site 1 out of 2 in the Crystal Structure of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme Oxygenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme Oxygenase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe901

b:26.8
occ:1.00
FE A:YOM901 0.0 26.8 1.0
OB A:YOM901 2.0 25.3 1.0
NA A:YOM901 2.1 29.9 1.0
OA A:YOM901 2.1 36.6 1.0
NB A:YOM901 2.2 25.9 1.0
NE2 A:HIS20 2.2 22.4 1.0
OE1 A:GLU24 2.3 31.4 1.0
CC1 A:YOM901 3.0 30.0 1.0
CC2 A:YOM901 3.0 26.5 1.0
CA A:YOM901 3.0 35.0 1.0
CB A:YOM901 3.0 28.3 1.0
CB2 A:YOM901 3.0 27.6 1.0
CA2 A:YOM901 3.1 39.8 1.0
CE1 A:HIS20 3.2 22.5 1.0
CD2 A:HIS20 3.2 21.4 1.0
CD A:GLU24 3.3 26.5 1.0
CA1 A:YOM901 3.4 38.7 1.0
CB1 A:YOM901 3.5 28.5 1.0
CG A:GLU24 3.8 26.5 1.0
ND1 A:HIS20 4.3 21.0 1.0
CB3 A:YOM901 4.3 33.0 1.0
CG A:HIS20 4.3 19.9 1.0
CC6 A:YOM901 4.3 31.6 1.0
CA3 A:YOM901 4.4 45.7 1.0
O A:HOH1088 4.4 40.5 1.0
CC3 A:YOM901 4.4 28.0 1.0
OE2 A:GLU24 4.4 30.0 1.0
CB A:GLU24 4.7 23.6 1.0
CE2 A:PHE201 4.8 14.6 1.0
CA6 A:YOM901 4.8 42.6 1.0
CB6 A:YOM901 4.9 33.0 1.0
O A:HOH1051 5.0 44.4 1.0

Iron binding site 2 out of 2 in 1wzg

Go back to Iron Binding Sites List in 1wzg
Iron binding site 2 out of 2 in the Crystal Structure of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme Oxygenase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme Oxygenase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe902

b:27.9
occ:1.00
FE B:YOM902 0.0 27.9 1.0
OB B:YOM902 2.0 28.7 1.0
NA B:YOM902 2.1 32.7 1.0
OA B:YOM902 2.1 36.8 1.0
NB B:YOM902 2.2 25.9 1.0
NE2 B:HIS20 2.2 16.4 1.0
OE2 B:GLU24 2.3 27.8 1.0
CC1 B:YOM902 3.0 33.8 1.0
CC2 B:YOM902 3.0 28.7 1.0
CA B:YOM902 3.0 40.6 1.0
CB2 B:YOM902 3.0 28.2 1.0
CB B:YOM902 3.0 24.0 1.0
CA2 B:YOM902 3.1 42.9 1.0
CD2 B:HIS20 3.1 17.3 1.0
CD B:GLU24 3.2 28.3 1.0
CE1 B:HIS20 3.3 20.8 1.0
CG B:GLU24 3.4 27.3 1.0
CA1 B:YOM902 3.4 46.3 1.0
CB1 B:YOM902 3.4 24.8 1.0
CB3 B:YOM902 4.3 35.0 1.0
OE1 B:GLU24 4.3 32.9 1.0
CG B:HIS20 4.3 18.2 1.0
CC3 B:YOM902 4.3 31.9 1.0
CC6 B:YOM902 4.3 45.5 1.0
ND1 B:HIS20 4.4 19.6 1.0
CA3 B:YOM902 4.4 50.7 1.0
CE2 B:PHE201 4.7 13.0 1.0
CA6 B:YOM902 4.8 56.1 1.0
CB6 B:YOM902 4.8 29.6 1.0
CB B:GLU24 4.9 26.6 1.0

Reference:

T.Ueno, N.Yokoi, M.Unno, T.Matsui, Y.Tokita, M.Yamada, M.Ikeda-Saito, H.Nakajima, Y.Watanabe. Design of Metal Cofactors Activated By A Protein-Protein Electron Transfer System. Proc.Natl.Acad.Sci.Usa V. 103 9416 2006.
ISSN: ISSN 0027-8424
PubMed: 16769893
DOI: 10.1073/PNAS.0510968103
Page generated: Sat Aug 3 16:43:32 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy