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Iron in PDB 1xk1: Crystal Structures of the G139A, G139A-No and G143H Mutants of Human Heme Oxygenase-1

Enzymatic activity of Crystal Structures of the G139A, G139A-No and G143H Mutants of Human Heme Oxygenase-1

All present enzymatic activity of Crystal Structures of the G139A, G139A-No and G143H Mutants of Human Heme Oxygenase-1:
1.14.99.3;

Protein crystallography data

The structure of Crystal Structures of the G139A, G139A-No and G143H Mutants of Human Heme Oxygenase-1, PDB code: 1xk1 was solved by L.Lad, P.R.Ortiz De Montellano, T.L.Poulos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.08
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.103, 75.212, 107.380, 90.00, 90.00, 90.00
R / Rfree (%) 27.1 / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structures of the G139A, G139A-No and G143H Mutants of Human Heme Oxygenase-1 (pdb code 1xk1). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structures of the G139A, G139A-No and G143H Mutants of Human Heme Oxygenase-1, PDB code: 1xk1:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1xk1

Go back to Iron Binding Sites List in 1xk1
Iron binding site 1 out of 2 in the Crystal Structures of the G139A, G139A-No and G143H Mutants of Human Heme Oxygenase-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structures of the G139A, G139A-No and G143H Mutants of Human Heme Oxygenase-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe300

b:39.8
occ:1.00
FE A:HEM300 0.0 39.8 1.0
NE2 A:HIS143 1.9 41.3 1.0
NC A:HEM300 2.0 39.5 1.0
NA A:HEM300 2.0 40.3 1.0
ND A:HEM300 2.0 39.4 1.0
NB A:HEM300 2.0 40.9 1.0
NE2 A:HIS25 2.1 40.2 1.0
CE1 A:HIS143 2.3 41.1 1.0
C4C A:HEM300 3.0 39.8 1.0
C1C A:HEM300 3.0 40.5 1.0
C1D A:HEM300 3.0 37.8 1.0
C4A A:HEM300 3.1 40.8 1.0
C1B A:HEM300 3.1 41.0 1.0
C4D A:HEM300 3.1 38.8 1.0
CE1 A:HIS25 3.1 40.5 1.0
C1A A:HEM300 3.1 42.0 1.0
C4B A:HEM300 3.1 41.2 1.0
CD2 A:HIS25 3.1 39.0 1.0
CD2 A:HIS143 3.1 41.3 1.0
CHD A:HEM300 3.4 37.8 1.0
CHB A:HEM300 3.4 40.8 1.0
CHC A:HEM300 3.4 41.0 1.0
CHA A:HEM300 3.5 40.7 1.0
ND1 A:HIS143 3.6 42.4 1.0
CG A:HIS143 4.0 41.3 1.0
ND1 A:HIS25 4.2 40.9 1.0
CG A:HIS25 4.2 41.7 1.0
C3C A:HEM300 4.3 40.3 1.0
C2C A:HEM300 4.3 40.2 1.0
C3A A:HEM300 4.3 41.9 1.0
C2D A:HEM300 4.3 37.4 1.0
C3D A:HEM300 4.3 37.7 1.0
C2A A:HEM300 4.3 42.9 1.0
C2B A:HEM300 4.3 41.8 1.0
C3B A:HEM300 4.3 42.3 1.0

Iron binding site 2 out of 2 in 1xk1

Go back to Iron Binding Sites List in 1xk1
Iron binding site 2 out of 2 in the Crystal Structures of the G139A, G139A-No and G143H Mutants of Human Heme Oxygenase-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structures of the G139A, G139A-No and G143H Mutants of Human Heme Oxygenase-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe300

b:48.8
occ:1.00
FE B:HEM300 0.0 48.8 1.0
NC B:HEM300 2.0 47.7 1.0
NA B:HEM300 2.0 49.5 1.0
ND B:HEM300 2.0 48.1 1.0
NB B:HEM300 2.0 49.6 1.0
NE2 B:HIS25 2.1 48.3 1.0
CE1 B:HIS143 2.2 52.7 1.0
NE2 B:HIS143 2.2 50.6 1.0
C4C B:HEM300 3.0 46.6 1.0
C1C B:HEM300 3.0 48.0 1.0
C1D B:HEM300 3.0 46.1 1.0
C1A B:HEM300 3.1 50.5 1.0
C4D B:HEM300 3.1 47.9 1.0
C4B B:HEM300 3.1 48.6 1.0
C1B B:HEM300 3.1 49.0 1.0
C4A B:HEM300 3.1 50.1 1.0
CD2 B:HIS25 3.1 47.5 1.0
CE1 B:HIS25 3.1 47.8 1.0
CHD B:HEM300 3.4 46.3 1.0
ND1 B:HIS143 3.4 54.4 1.0
CHA B:HEM300 3.4 48.9 1.0
CHC B:HEM300 3.4 48.0 1.0
CHB B:HEM300 3.5 49.6 1.0
CD2 B:HIS143 3.5 53.7 1.0
CG B:HIS143 4.1 55.1 1.0
ND1 B:HIS25 4.2 47.1 1.0
CG B:HIS25 4.2 47.7 1.0
C3C B:HEM300 4.3 46.6 1.0
C2C B:HEM300 4.3 47.0 1.0
C2D B:HEM300 4.3 46.7 1.0
C2A B:HEM300 4.3 51.2 1.0
C3D B:HEM300 4.3 47.1 1.0
C2B B:HEM300 4.3 49.7 1.0
C3A B:HEM300 4.3 51.4 1.0
C3B B:HEM300 4.3 50.1 1.0
O B:GLY139 4.9 42.2 1.0

Reference:

L.Lad, A.Koshkin, P.R.Ortiz De Montellano, T.L.Poulos. Crystal Structures of the G139A, G139A-No and G143H Mutants of Human Heme Oxygenase-1. A Finely Tuned Hydrogen-Bonding Network Controls Oxygenase Versus Peroxidase Activity. J.Biol.Inorg.Chem. V. 10 138 2005.
ISSN: ISSN 0949-8257
PubMed: 15690204
DOI: 10.1007/S00775-004-0620-6
Page generated: Sat Aug 3 16:56:02 2024

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