Iron in PDB 1xvx: Crystal Structure of Iron-Loaded Yersinia Enterocolitica Yfua

The structure of Crystal Structure of Iron-Loaded Yersinia Enterocolitica Yfua, PDB code: 1xvx was solved by S.R.Shouldice, D.E.Mcree, D.R.Dougan, L.W.Tari, A.B.Schryvers, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	60.86 / 1.53
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	108.392, 46.951, 62.454, 90.00, 103.51, 90.00
R / Rfree (%)	16.1 / 19.3

The structure of Crystal Structure of Iron-Loaded Yersinia Enterocolitica Yfua also contains other interesting chemical elements:

Zinc

(Zn)

5 atoms

The binding sites of Iron atom in the Crystal Structure of Iron-Loaded Yersinia Enterocolitica Yfua (pdb code 1xvx). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Iron-Loaded Yersinia Enterocolitica Yfua, PDB code: 1xvx:

Iron binding site 1 out of 1 in the Crystal Structure of Iron-Loaded Yersinia Enterocolitica Yfua


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Iron-Loaded Yersinia Enterocolitica Yfua within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe313 b:16.4 occ:1.00 OH A:TYR198 2.0 14.3 1.0 OH A:TYR199 2.1 13.9 1.0 OD2 A:ASP144 2.1 13.9 1.0 OE1 A:GLU62 2.2 12.2 1.0 O A:HOH371 2.2 7.9 1.0 NE2 A:HIS14 2.2 16.2 1.0 CZ A:TYR199 3.1 15.1 1.0 CG A:ASP144 3.1 14.3 1.0 CE1 A:HIS14 3.1 15.7 1.0 CD A:GLU62 3.1 15.7 1.0 CZ A:TYR198 3.2 13.4 1.0 CD2 A:HIS14 3.2 16.8 1.0 OE2 A:GLU62 3.5 17.0 1.0 OD1 A:ASP144 3.5 14.9 1.0 CE1 A:TYR198 3.6 12.1 1.0 CE2 A:TYR199 3.7 13.6 1.0 NH1 A:ARG104 4.1 13.9 1.0 CE1 A:TYR199 4.1 14.0 1.0 O A:HOH445 4.1 11.4 1.0 NH2 A:ARG104 4.3 12.8 1.0 ND1 A:HIS14 4.3 19.1 1.0 CG A:HIS14 4.3 19.0 1.0 CE2 A:TYR198 4.4 12.6 1.0 ND2 A:ASN178 4.4 14.9 1.0 CB A:ASP144 4.4 12.9 1.0 CG A:GLU62 4.5 13.7 1.0 O A:HOH435 4.5 9.9 1.0 CZ A:ARG104 4.6 13.7 1.0 CD2 A:TYR196 4.9 14.5 1.0 CD2 A:TYR199 5.0 14.1 1.0

S.R.Shouldice, D.E.Mcree, D.R.Dougan, L.W.Tari, A.B.Schryvers. Novel Anion-Independent Iron Coordination By Members of A Third Class of Bacterial Periplasmic Ferric Ion-Binding Proteins J.Biol.Chem. V. 280 5820 2005.
ISSN: ISSN 0021-9258
PubMed: 15576371
DOI: 10.1074/JBC.M411238200