Iron in PDB 1yge: Lipoxygenase-1 (Soybean) at 100K

All present enzymatic activity of Lipoxygenase-1 (Soybean) at 100K:
1.13.11.12;

The structure of Lipoxygenase-1 (Soybean) at 100K, PDB code: 1yge was solved by W.Minor, J.Steczko, B.Stec, Z.Otwinowski, J.T.Bolin, R.Walter, B.Axelrod, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 1.40
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	94.900, 94.000, 49.900, 90.00, 90.10, 90.00
R / Rfree (%)	19.7 / 24.3

The binding sites of Iron atom in the Lipoxygenase-1 (Soybean) at 100K (pdb code 1yge). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Lipoxygenase-1 (Soybean) at 100K, PDB code: 1yge:

Iron binding site 1 out of 1 in the Lipoxygenase-1 (Soybean) at 100K


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Lipoxygenase-1 (Soybean) at 100K within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe840 b:22.2 occ:1.00 NE2 A:HIS690 2.2 9.4 1.0 NE2 A:HIS499 2.2 17.4 1.0 NE2 A:HIS504 2.3 13.9 1.0 OXT A:ILE839 2.4 16.6 1.0 O A:HOH842 2.6 26.9 1.0 CE1 A:HIS499 3.0 17.4 1.0 OD1 A:ASN694 3.1 11.5 1.0 CE1 A:HIS504 3.2 13.6 1.0 CE1 A:HIS690 3.2 9.5 1.0 CD2 A:HIS690 3.2 9.6 1.0 C A:ILE839 3.3 16.4 1.0 CD2 A:HIS504 3.3 13.6 1.0 CD2 A:HIS499 3.4 16.6 1.0 O A:ILE839 3.5 17.1 1.0 CG A:ASN694 3.7 9.8 1.0 CB A:ASN694 4.1 9.7 1.0 ND1 A:HIS499 4.3 17.1 1.0 ND1 A:HIS690 4.3 9.7 1.0 ND1 A:HIS504 4.4 13.3 1.0 CG A:HIS690 4.4 9.6 1.0 CG A:HIS499 4.4 16.0 1.0 CG A:HIS504 4.4 13.1 1.0 CG2 A:ILE837 4.5 11.0 1.0 ND2 A:ASN694 4.6 9.6 1.0 CA A:ILE839 4.7 15.6 1.0 O A:HOH841 4.8 50.0 1.0 N A:ILE839 4.9 15.2 1.0 OG1 A:THR503 4.9 11.2 1.0

W.Minor, J.Steczko, B.Stec, Z.Otwinowski, J.T.Bolin, R.Walter, B.Axelrod. Crystal Structure of Soybean Lipoxygenase L-1 at 1.4 A Resolution. Biochemistry V. 35 10687 1996.
ISSN: ISSN 0006-2960
PubMed: 8718858
DOI: 10.1021/BI960576U