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Iron in PDB 1yrd: X-Ray Crystal Structure of Perdeuterated Cytochrome P450CAM

Enzymatic activity of X-Ray Crystal Structure of Perdeuterated Cytochrome P450CAM

All present enzymatic activity of X-Ray Crystal Structure of Perdeuterated Cytochrome P450CAM:
1.14.15.1;

Protein crystallography data

The structure of X-Ray Crystal Structure of Perdeuterated Cytochrome P450CAM, PDB code: 1yrd was solved by F.Meilleur, M.-T.Dauvergne, I.Schlichting, D.A.A.Myles, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.70
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 63.430, 63.430, 248.640, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 21.3

Other elements in 1yrd:

The structure of X-Ray Crystal Structure of Perdeuterated Cytochrome P450CAM also contains other interesting chemical elements:

Potassium (K) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the X-Ray Crystal Structure of Perdeuterated Cytochrome P450CAM (pdb code 1yrd). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the X-Ray Crystal Structure of Perdeuterated Cytochrome P450CAM, PDB code: 1yrd:

Iron binding site 1 out of 1 in 1yrd

Go back to Iron Binding Sites List in 1yrd
Iron binding site 1 out of 1 in the X-Ray Crystal Structure of Perdeuterated Cytochrome P450CAM


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Crystal Structure of Perdeuterated Cytochrome P450CAM within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe417

b:13.8
occ:1.00
FE A:HEM417 0.0 13.8 1.0
NA A:HEM417 2.0 13.6 1.0
NB A:HEM417 2.0 12.7 1.0
NC A:HEM417 2.0 13.6 1.0
ND A:HEM417 2.1 14.1 1.0
SG A:CYS357 2.5 14.3 1.0
C1A A:HEM417 3.1 12.7 1.0
C4A A:HEM417 3.1 12.9 1.0
C1B A:HEM417 3.1 13.0 1.0
C4D A:HEM417 3.1 13.4 1.0
C4B A:HEM417 3.1 13.0 1.0
C1C A:HEM417 3.1 13.6 1.0
C1D A:HEM417 3.1 14.0 1.0
C4C A:HEM417 3.1 16.1 1.0
CB A:CYS357 3.4 12.4 1.0
CHC A:HEM417 3.4 13.6 1.0
CHB A:HEM417 3.5 13.4 1.0
CHA A:HEM417 3.5 12.8 1.0
CHD A:HEM417 3.5 16.2 1.0
C5 A:CAM420 3.9 19.9 1.0
CA A:CYS357 4.1 14.4 1.0
C3D A:HEM417 4.3 12.9 1.0
C2B A:HEM417 4.3 12.0 1.0
C3B A:HEM417 4.3 14.3 1.0
C2C A:HEM417 4.3 15.0 1.0
C2D A:HEM417 4.3 15.3 1.0
C3A A:HEM417 4.3 13.2 1.0
C3C A:HEM417 4.3 16.6 1.0
C2A A:HEM417 4.4 14.5 1.0
C4 A:CAM420 4.5 20.6 1.0
N A:GLY359 4.6 15.6 1.0
N A:LEU358 4.7 15.5 1.0
C A:CYS357 4.8 15.1 1.0
C9 A:CAM420 4.9 19.8 1.0

Reference:

F.Meilleur, M.T.Dauvergne, I.Schlichting, D.A.Myles. Production and X-Ray Crystallographic Analysis of Fully Deuterated Cytochrome P450CAM. Acta Crystallogr.,Sect.D V. 61 539 2005.
ISSN: ISSN 0907-4449
PubMed: 15858263
DOI: 10.1107/S0907444905003872
Page generated: Sun Dec 13 14:38:09 2020

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