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Iron in PDB 1ytc: Thermodynamic Cycles As Probes of Structure-Function Relationships in Unfolded Proteins

Protein crystallography data

The structure of Thermodynamic Cycles As Probes of Structure-Function Relationships in Unfolded Proteins, PDB code: 1ytc was solved by Y.Luo, G.D.Brayer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 1.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 36.660, 36.660, 138.920, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Thermodynamic Cycles As Probes of Structure-Function Relationships in Unfolded Proteins (pdb code 1ytc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Thermodynamic Cycles As Probes of Structure-Function Relationships in Unfolded Proteins, PDB code: 1ytc:

Iron binding site 1 out of 1 in 1ytc

Go back to Iron Binding Sites List in 1ytc
Iron binding site 1 out of 1 in the Thermodynamic Cycles As Probes of Structure-Function Relationships in Unfolded Proteins


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Thermodynamic Cycles As Probes of Structure-Function Relationships in Unfolded Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe104

b:12.4
occ:1.00
FE A:HEM104 0.0 12.4 1.0
NA A:HEM104 2.0 9.3 1.0
NC A:HEM104 2.0 10.1 1.0
NB A:HEM104 2.0 11.0 1.0
ND A:HEM104 2.0 10.9 1.0
NE2 A:HIS18 2.0 10.3 1.0
SD A:MET80 2.4 11.7 1.0
CE1 A:HIS18 3.0 10.2 1.0
C1D A:HEM104 3.0 10.0 1.0
C1B A:HEM104 3.0 11.3 1.0
CD2 A:HIS18 3.0 9.9 1.0
C1C A:HEM104 3.0 11.7 1.0
C1A A:HEM104 3.0 9.6 1.0
C4D A:HEM104 3.0 11.0 1.0
C4C A:HEM104 3.0 11.3 1.0
C4B A:HEM104 3.1 8.9 1.0
C4A A:HEM104 3.1 9.4 1.0
CHD A:HEM104 3.4 9.3 1.0
CHB A:HEM104 3.4 10.5 1.0
CE A:MET80 3.4 13.2 1.0
CHC A:HEM104 3.4 9.5 1.0
CHA A:HEM104 3.4 9.6 1.0
CG A:MET80 3.4 13.7 1.0
ND1 A:HIS18 4.1 11.8 1.0
CG A:HIS18 4.2 9.4 1.0
C2A A:HEM104 4.2 10.2 1.0
CB A:MET80 4.3 13.1 1.0
C3D A:HEM104 4.3 10.5 1.0
C2C A:HEM104 4.3 11.4 1.0
C3C A:HEM104 4.3 11.4 1.0
C3A A:HEM104 4.3 10.0 1.0
C2B A:HEM104 4.3 10.0 1.0
C3B A:HEM104 4.3 9.7 1.0
C2D A:HEM104 4.3 11.1 1.0

Reference:

W.A.Mcgee, F.I.Rosell, J.R.Liggins, S.Rodriguez-Ghidarpour, Y.Luo, J.Chen, G.D.Brayer, A.G.Mauk, B.T.Nall. Thermodynamic Cycles As Probes of Structure in Unfolded Proteins. Biochemistry V. 35 1995 1996.
ISSN: ISSN 0006-2960
PubMed: 8639684
DOI: 10.1021/BI951228F
Page generated: Sun Dec 13 14:38:12 2020

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