Atomistry » Iron » PDB 1yqp-1zj9 » 1z8p
Atomistry »
  Iron »
    PDB 1yqp-1zj9 »
      1z8p »

Iron in PDB 1z8p: Ferrous Dioxygen Complex of the A245S Cytochrome P450ERYF

Protein crystallography data

The structure of Ferrous Dioxygen Complex of the A245S Cytochrome P450ERYF, PDB code: 1z8p was solved by T.L.Poulos, S.Nagano, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.45 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.940, 78.470, 96.790, 90.00, 90.00, 90.00
R / Rfree (%) 20.1 / 22.9

Iron Binding Sites:

The binding sites of Iron atom in the Ferrous Dioxygen Complex of the A245S Cytochrome P450ERYF (pdb code 1z8p). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Ferrous Dioxygen Complex of the A245S Cytochrome P450ERYF, PDB code: 1z8p:

Iron binding site 1 out of 1 in 1z8p

Go back to Iron Binding Sites List in 1z8p
Iron binding site 1 out of 1 in the Ferrous Dioxygen Complex of the A245S Cytochrome P450ERYF


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Ferrous Dioxygen Complex of the A245S Cytochrome P450ERYF within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe410

b:13.1
occ:1.00
FE A:HEM410 0.0 13.1 1.0
O1 A:OXY417 1.8 17.5 0.8
NA A:HEM410 2.0 10.8 1.0
NB A:HEM410 2.0 14.3 1.0
ND A:HEM410 2.0 9.8 1.0
NC A:HEM410 2.0 10.5 1.0
SG A:CYS351 2.3 16.2 1.0
O2 A:OXY417 2.8 24.7 0.8
C1A A:HEM410 3.0 9.7 1.0
C1C A:HEM410 3.0 12.2 1.0
C4B A:HEM410 3.1 12.7 1.0
C4A A:HEM410 3.1 12.3 1.0
C4D A:HEM410 3.1 10.3 1.0
C1B A:HEM410 3.1 14.3 1.0
C4C A:HEM410 3.1 11.7 1.0
C1D A:HEM410 3.1 11.4 1.0
CHA A:HEM410 3.4 10.2 1.0
CHC A:HEM410 3.4 13.1 1.0
CHB A:HEM410 3.4 13.9 1.0
CHD A:HEM410 3.5 10.6 1.0
CB A:CYS351 3.5 13.7 1.0
CA A:CYS351 4.1 11.6 1.0
C2C A:HEM410 4.3 11.4 1.0
C3A A:HEM410 4.3 11.7 1.0
C2A A:HEM410 4.3 7.7 1.0
C3B A:HEM410 4.3 15.9 1.0
C3C A:HEM410 4.3 12.0 1.0
C2B A:HEM410 4.3 13.8 1.0
C2D A:HEM410 4.3 9.8 1.0
C3D A:HEM410 4.3 12.3 1.0
N A:GLY353 4.5 11.8 1.0
C6 A:DEB420 4.6 16.7 1.0
N A:MET352 4.7 12.2 1.0
C23 A:DEB420 4.7 15.9 1.0
C A:CYS351 4.8 13.1 1.0
O21 A:DEB420 4.9 22.8 1.0
CA A:GLY353 5.0 13.8 1.0

Reference:

S.Nagano, J.R.Cupp-Vickery, T.L.Poulos. Crystal Structures of the Ferrous Dioxygen Complex of Wild-Type Cytochrome P450ERYF and Its Mutants, A245S and A245T: Investigation of the Proton Transfer System in P450ERYF. J.Biol.Chem. V. 280 22102 2005.
ISSN: ISSN 0021-9258
PubMed: 15824115
DOI: 10.1074/JBC.M501732200
Page generated: Sun Dec 13 14:38:42 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy