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Iron in PDB 2b4z: Crystal Structure of Cytochrome C From Bovine Heart at 1.5 A Resolution.

Protein crystallography data

The structure of Crystal Structure of Cytochrome C From Bovine Heart at 1.5 A Resolution., PDB code: 2b4z was solved by N.Mirkin, J.Jakoncic, V.Stojanoff, A.Moreno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.52 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.840, 54.480, 55.330, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 21.8

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Cytochrome C From Bovine Heart at 1.5 A Resolution. (pdb code 2b4z). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Cytochrome C From Bovine Heart at 1.5 A Resolution., PDB code: 2b4z:

Iron binding site 1 out of 1 in 2b4z

Go back to Iron Binding Sites List in 2b4z
Iron binding site 1 out of 1 in the Crystal Structure of Cytochrome C From Bovine Heart at 1.5 A Resolution.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Cytochrome C From Bovine Heart at 1.5 A Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe500

b:7.4
occ:1.00
FE A:HEM500 0.0 7.4 1.0
NB A:HEM500 2.0 8.5 1.0
NA A:HEM500 2.0 6.9 1.0
ND A:HEM500 2.0 7.3 1.0
NC A:HEM500 2.0 8.7 1.0
NE2 A:HIS18 2.1 8.5 1.0
SD A:MET80 2.3 8.2 1.0
C1D A:HEM500 3.0 9.8 1.0
C1B A:HEM500 3.0 9.6 1.0
C4C A:HEM500 3.0 10.8 1.0
C1C A:HEM500 3.0 8.9 1.0
C4D A:HEM500 3.0 8.6 1.0
C4B A:HEM500 3.0 8.7 1.0
C4A A:HEM500 3.0 7.2 1.0
C1A A:HEM500 3.0 7.4 1.0
CE1 A:HIS18 3.1 6.6 1.0
CD2 A:HIS18 3.1 7.7 1.0
CHB A:HEM500 3.4 9.3 1.0
CHD A:HEM500 3.4 10.8 1.0
CHA A:HEM500 3.4 7.9 1.0
CHC A:HEM500 3.4 9.0 1.0
CG A:MET80 3.5 8.3 1.0
CE A:MET80 3.5 9.9 1.0
ND1 A:HIS18 4.2 6.8 1.0
CG A:HIS18 4.2 7.8 1.0
C3B A:HEM500 4.2 10.5 1.0
C3A A:HEM500 4.2 6.8 1.0
CB A:MET80 4.3 9.0 1.0
C2B A:HEM500 4.3 10.8 1.0
C2A A:HEM500 4.3 7.7 1.0
C3D A:HEM500 4.3 9.6 1.0
C2D A:HEM500 4.3 10.3 1.0
C2C A:HEM500 4.3 10.6 1.0
C3C A:HEM500 4.3 13.1 1.0
OH A:TYR67 4.8 10.8 1.0

Reference:

N.Mirkin, J.Jaconcic, V.Stojanoff, A.Moreno. High Resolution X-Ray Crystallographic Structure of Bovine Heart Cytochrome C and Its Application to the Design of An Electron Transfer Biosensor. Proteins V. 70 83 2008.
ISSN: ISSN 0887-3585
PubMed: 17634981
DOI: 10.1002/PROT.21452
Page generated: Sun Dec 13 14:40:27 2020

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