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Iron in PDB 2bli: L29W Mb Deoxy

Protein crystallography data

The structure of L29W Mb Deoxy, PDB code: 2bli was solved by K.Nienhaus, A.Ostermann, G.U.Nienhaus, F.G.Parak, M.Schmidt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.70
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 91.750, 91.750, 46.180, 90.00, 90.00, 120.00
R / Rfree (%) 18.8 / 20.7

Iron Binding Sites:

The binding sites of Iron atom in the L29W Mb Deoxy (pdb code 2bli). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the L29W Mb Deoxy, PDB code: 2bli:

Iron binding site 1 out of 1 in 2bli

Go back to Iron Binding Sites List in 2bli
Iron binding site 1 out of 1 in the L29W Mb Deoxy


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of L29W Mb Deoxy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1154

b:13.4
occ:1.00
FE A:HEM1154 0.0 13.4 1.0
NA A:HEM1154 2.0 13.0 1.0
NB A:HEM1154 2.0 12.5 1.0
NC A:HEM1154 2.0 11.9 1.0
ND A:HEM1154 2.0 13.3 1.0
NE2 A:HIS93 2.2 14.9 1.0
C4A A:HEM1154 3.0 12.2 1.0
C1B A:HEM1154 3.0 10.4 1.0
C4B A:HEM1154 3.1 10.5 1.0
C1D A:HEM1154 3.1 12.7 1.0
C1A A:HEM1154 3.1 13.8 1.0
C1C A:HEM1154 3.1 11.8 1.0
C4C A:HEM1154 3.1 12.5 1.0
C4D A:HEM1154 3.1 14.3 1.0
CE1 A:HIS93 3.1 13.8 1.0
CD2 A:HIS93 3.2 15.3 1.0
CHB A:HEM1154 3.4 12.3 1.0
CHD A:HEM1154 3.5 12.7 1.0
CHC A:HEM1154 3.5 11.9 1.0
CHA A:HEM1154 3.5 13.2 1.0
ND1 A:HIS93 4.2 13.3 1.0
C3A A:HEM1154 4.3 12.4 1.0
C2B A:HEM1154 4.3 11.7 1.0
C2A A:HEM1154 4.3 12.9 1.0
CG A:HIS93 4.3 14.5 1.0
C2D A:HEM1154 4.3 14.6 1.0
C3B A:HEM1154 4.3 11.7 1.0
C3D A:HEM1154 4.3 15.0 1.0
C2C A:HEM1154 4.3 13.0 1.0
C3C A:HEM1154 4.4 14.4 1.0
CE1 A:HIS64 4.6 13.7 1.0
CG2 A:VAL68 4.6 12.0 1.0
NE2 A:HIS64 5.0 17.3 1.0

Reference:

K.Nienhaus, A.Ostermann, G.U.Nienhaus, F.G.Parak, M.Schmidt. Ligand Migration and Protein Fluctuations in Myoglobin Mutant L29W Biochemistry V. 44 5095 2005.
ISSN: ISSN 0006-2960
PubMed: 15794647
DOI: 10.1021/BI047513T
Page generated: Sat Aug 3 19:40:43 2024

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