Atomistry » Iron » PDB 2c2c-2ciy » 2c7x
Atomistry »
  Iron »
    PDB 2c2c-2ciy »
      2c7x »

Iron in PDB 2c7x: Crystal Structure of Narbomycin-Bound Cytochrome P450 Pikc (CYP107L1)

Protein crystallography data

The structure of Crystal Structure of Narbomycin-Bound Cytochrome P450 Pikc (CYP107L1), PDB code: 2c7x was solved by D.H.Sherman, S.Li, L.V.Yermalitskaya, Y.Kim, J.A.Smith, M.R.Waterman, L.M.Podust, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.77 / 1.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 58.963, 64.896, 92.830, 90.00, 90.00, 90.00
R / Rfree (%) 20.7 / 23.2

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Narbomycin-Bound Cytochrome P450 Pikc (CYP107L1) (pdb code 2c7x). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Narbomycin-Bound Cytochrome P450 Pikc (CYP107L1), PDB code: 2c7x:

Iron binding site 1 out of 1 in 2c7x

Go back to Iron Binding Sites List in 2c7x
Iron binding site 1 out of 1 in the Crystal Structure of Narbomycin-Bound Cytochrome P450 Pikc (CYP107L1)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Narbomycin-Bound Cytochrome P450 Pikc (CYP107L1) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1407

b:23.3
occ:1.00
FE A:HEM1407 0.0 23.3 1.0
NA A:HEM1407 2.0 21.3 1.0
NC A:HEM1407 2.0 21.9 1.0
NB A:HEM1407 2.0 19.2 1.0
ND A:HEM1407 2.0 23.1 1.0
SG A:CYS354 2.7 23.9 1.0
C1C A:HEM1407 3.0 22.6 1.0
C4B A:HEM1407 3.0 21.8 1.0
C4A A:HEM1407 3.0 22.0 1.0
C4D A:HEM1407 3.0 22.1 1.0
C1B A:HEM1407 3.1 22.4 1.0
C1D A:HEM1407 3.1 24.2 1.0
C1A A:HEM1407 3.1 21.9 1.0
C4C A:HEM1407 3.1 24.5 1.0
CHC A:HEM1407 3.4 22.9 1.0
CB A:CYS354 3.4 22.1 1.0
CHB A:HEM1407 3.4 20.5 1.0
CHA A:HEM1407 3.5 23.4 1.0
CHD A:HEM1407 3.5 25.0 1.0
C1 A:NRB1408 3.9 39.2 1.0
O A:ALA243 4.0 38.6 1.0
CA A:CYS354 4.1 23.7 1.0
C3D A:HEM1407 4.3 23.9 1.0
C3A A:HEM1407 4.3 21.6 1.0
C3B A:HEM1407 4.3 22.3 1.0
C2C A:HEM1407 4.3 24.0 1.0
C2D A:HEM1407 4.3 24.6 1.0
C2A A:HEM1407 4.3 22.2 1.0
C2B A:HEM1407 4.3 20.6 1.0
C3C A:HEM1407 4.3 26.3 1.0
C A:ALA243 4.6 38.6 1.0
CB A:ALA243 4.7 36.5 1.0
N A:GLY356 4.8 26.5 1.0
C A:CYS354 4.8 24.7 1.0
N A:ILE355 4.9 24.6 1.0

Reference:

D.H.Sherman, S.Li, L.V.Yermalitskaya, Y.Kim, J.A.Smith, M.R.Waterman, L.M.Podust. The Structural Basis For Substrate Anchoring, Active Site Selectivity, and Product Formation By P450 Pikc From Streptomyces Venezuelae. J.Biol.Chem. V. 281 26289 2006.
ISSN: ISSN 0021-9258
PubMed: 16825192
DOI: 10.1074/JBC.M605478200
Page generated: Sat Aug 3 20:05:16 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy