Iron in PDB 2chu: Ceue in Complex with Mecam
Protein crystallography data
The structure of Ceue in Complex with Mecam, PDB code: 2chu
was solved by
A.Muller,
A.J.Wilkinson,
K.S.Wilson,
A.K.Duhme-Klair,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
69.17 /
2.40
|
Space group
|
P 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
73.072,
42.445,
57.523,
91.29,
97.06,
107.34
|
R / Rfree (%)
|
17 /
24.6
|
Other elements in 2chu:
The structure of Ceue in Complex with Mecam also contains other interesting chemical elements:
Iron Binding Sites:
The binding sites of Iron atom in the Ceue in Complex with Mecam
(pdb code 2chu). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
Ceue in Complex with Mecam, PDB code: 2chu:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 2chu
Go back to
Iron Binding Sites List in 2chu
Iron binding site 1 out
of 2 in the Ceue in Complex with Mecam
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Ceue in Complex with Mecam within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe1313
b:41.2
occ:1.00
|
O42
|
B:ECA1311
|
1.8
|
46.9
|
1.0
|
O41
|
B:ECA1311
|
1.9
|
48.7
|
1.0
|
O30
|
B:ECA1311
|
2.0
|
38.1
|
1.0
|
O20
|
B:ECA1312
|
2.1
|
40.8
|
1.0
|
O19
|
B:ECA1312
|
2.1
|
39.0
|
1.0
|
O31
|
B:ECA1311
|
2.2
|
40.4
|
1.0
|
C39
|
B:ECA1311
|
2.7
|
46.6
|
1.0
|
C40
|
B:ECA1311
|
2.7
|
46.3
|
1.0
|
C29
|
B:ECA1311
|
2.9
|
41.8
|
1.0
|
C17
|
B:ECA1312
|
2.9
|
39.1
|
1.0
|
C28
|
B:ECA1311
|
2.9
|
40.6
|
1.0
|
C18
|
B:ECA1312
|
2.9
|
41.2
|
1.0
|
OH
|
B:TYR288
|
3.5
|
51.0
|
1.0
|
C38
|
B:ECA1311
|
4.0
|
44.3
|
1.0
|
C35
|
B:ECA1311
|
4.1
|
47.0
|
1.0
|
NE
|
B:ARG118
|
4.1
|
48.7
|
1.0
|
NH2
|
B:ARG205
|
4.1
|
61.8
|
1.0
|
NE2
|
B:GLN98
|
4.2
|
53.3
|
1.0
|
C24
|
B:ECA1311
|
4.2
|
41.9
|
1.0
|
C27
|
B:ECA1311
|
4.2
|
40.5
|
1.0
|
C16
|
B:ECA1312
|
4.2
|
37.3
|
1.0
|
NH1
|
B:ARG205
|
4.3
|
68.5
|
1.0
|
C13
|
B:ECA1312
|
4.3
|
39.3
|
1.0
|
NH2
|
B:ARG249
|
4.3
|
50.7
|
1.0
|
NH2
|
B:ARG118
|
4.4
|
49.1
|
1.0
|
CZ
|
B:TYR288
|
4.4
|
53.7
|
1.0
|
N32
|
B:ECA1311
|
4.6
|
44.4
|
1.0
|
N21
|
B:ECA1311
|
4.6
|
47.3
|
1.0
|
CZ
|
B:ARG205
|
4.7
|
64.3
|
1.0
|
N10
|
B:ECA1312
|
4.7
|
37.6
|
1.0
|
CZ
|
B:ARG118
|
4.7
|
50.6
|
1.0
|
C33
|
B:ECA1311
|
4.8
|
46.4
|
1.0
|
CE1
|
B:TYR288
|
4.8
|
53.8
|
1.0
|
C22
|
B:ECA1311
|
5.0
|
43.5
|
1.0
|
C37
|
B:ECA1311
|
5.0
|
48.4
|
1.0
|
|
Iron binding site 2 out
of 2 in 2chu
Go back to
Iron Binding Sites List in 2chu
Iron binding site 2 out
of 2 in the Ceue in Complex with Mecam
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Ceue in Complex with Mecam within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe1314
b:44.3
occ:1.00
|
O31
|
B:ECA1312
|
1.7
|
51.9
|
1.0
|
O41
|
B:ECA1312
|
2.0
|
38.1
|
1.0
|
O20
|
B:ECA1311
|
2.1
|
40.0
|
1.0
|
O42
|
B:ECA1312
|
2.2
|
38.5
|
1.0
|
O30
|
B:ECA1312
|
2.2
|
52.6
|
1.0
|
O19
|
B:ECA1311
|
2.2
|
38.6
|
1.0
|
C28
|
B:ECA1312
|
2.7
|
53.0
|
1.0
|
C29
|
B:ECA1312
|
2.8
|
52.9
|
1.0
|
C40
|
B:ECA1312
|
2.9
|
39.1
|
1.0
|
C17
|
B:ECA1311
|
2.9
|
40.9
|
1.0
|
C18
|
B:ECA1311
|
2.9
|
39.4
|
1.0
|
C39
|
B:ECA1312
|
2.9
|
40.8
|
1.0
|
OH
|
A:TYR288
|
3.5
|
52.2
|
1.0
|
C27
|
B:ECA1312
|
4.0
|
51.7
|
1.0
|
NH1
|
A:ARG205
|
4.1
|
67.1
|
1.0
|
NE
|
A:ARG118
|
4.1
|
50.1
|
1.0
|
NE2
|
A:GLN98
|
4.1
|
55.1
|
1.0
|
C24
|
B:ECA1312
|
4.2
|
52.8
|
1.0
|
C35
|
B:ECA1312
|
4.2
|
40.4
|
1.0
|
C16
|
B:ECA1311
|
4.2
|
40.0
|
1.0
|
C13
|
B:ECA1311
|
4.3
|
39.4
|
1.0
|
C38
|
B:ECA1312
|
4.3
|
41.8
|
1.0
|
NH2
|
A:ARG205
|
4.3
|
62.1
|
1.0
|
NH2
|
A:ARG118
|
4.3
|
48.1
|
1.0
|
NH2
|
A:ARG249
|
4.4
|
54.9
|
1.0
|
CZ
|
A:TYR288
|
4.4
|
53.6
|
1.0
|
N32
|
B:ECA1312
|
4.5
|
44.9
|
1.0
|
N10
|
B:ECA1311
|
4.6
|
38.8
|
1.0
|
CZ
|
A:ARG205
|
4.7
|
63.2
|
1.0
|
CZ
|
A:ARG118
|
4.7
|
49.1
|
1.0
|
N21
|
B:ECA1312
|
4.7
|
46.0
|
1.0
|
C33
|
B:ECA1312
|
4.9
|
42.5
|
1.0
|
C22
|
B:ECA1312
|
4.9
|
50.5
|
1.0
|
CE1
|
A:TYR288
|
5.0
|
52.8
|
1.0
|
C11
|
B:ECA1311
|
5.0
|
40.5
|
1.0
|
|
Reference:
A.Muller,
A.J.Wilkinson,
K.S.Wilson,
A.K.Duhme-Klair.
An [{Fe(Mecam)}(2)](6-) Bridge in the Crystal Structure of A Ferric Enterobactin Binding Protein. Angew.Chem.Int.Ed.Engl. V. 45 5132 2006.
ISSN: ISSN 1433-7851
PubMed: 16927323
DOI: 10.1002/ANIE.200601198
Page generated: Sat Aug 3 20:15:32 2024
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