Iron in PDB 2dsx: Crystal Structure of Rubredoxin From Desulfovibrio Gigas to Ultra-High 0.68 A Resolution

The structure of Crystal Structure of Rubredoxin From Desulfovibrio Gigas to Ultra-High 0.68 A Resolution, PDB code: 2dsx was solved by C.-J.Chen, Y.-H.Lin, Y.-C.Huang, M.-Y.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 0.68
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	19.474, 41.324, 24.129, 90.00, 108.20, 90.00
R / Rfree (%)	9.9 / 11.1

The binding sites of Iron atom in the Crystal Structure of Rubredoxin From Desulfovibrio Gigas to Ultra-High 0.68 A Resolution (pdb code 2dsx). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Rubredoxin From Desulfovibrio Gigas to Ultra-High 0.68 A Resolution, PDB code: 2dsx:

Iron binding site 1 out of 1 in the Crystal Structure of Rubredoxin From Desulfovibrio Gigas to Ultra-High 0.68 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Rubredoxin From Desulfovibrio Gigas to Ultra-High 0.68 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe501 b:4.1 occ:1.00 SG A:CYS42 2.3 4.5 1.0 SG A:CYS9 2.3 4.5 1.0 SG A:CYS39 2.3 4.3 1.0 SG A:CYS6 2.3 4.0 1.0 CB A:CYS39 3.2 4.2 1.0 CB A:CYS6 3.3 4.0 1.0 CB A:CYS42 3.4 4.9 1.0 CB A:CYS9 3.4 4.6 1.0 N A:CYS9 3.8 4.4 1.0 N A:CYS42 3.9 4.7 1.0 CA A:CYS9 4.1 4.6 1.0 CA A:CYS42 4.2 4.8 1.0 CB A:TYR11 4.3 5.3 1.0 CB A:VAL8 4.6 4.1 1.0 CB A:ALA44 4.6 6.6 1.0 CA A:CYS39 4.6 4.2 1.0 C A:CYS9 4.7 4.8 1.0 CA A:CYS6 4.7 4.0 1.0 N A:TYR11 4.7 4.9 1.0 N A:GLY10 4.7 4.6 1.0 C A:VAL8 4.8 4.3 1.0 CB A:VAL41 4.8 5.2 1.0 C A:CYS42 4.8 4.7 1.0 N A:ALA44 4.9 4.9 1.0 N A:GLY43 4.9 4.6 1.0 CZ A:PHE49 4.9 5.2 1.0 C A:VAL41 5.0 5.3 1.0 CG1 A:VAL8 5.0 5.2 1.0

C.J.Chen, Y.H.Lin, Y.C.Huang, M.Y.Liu. Crystal Structure of Rubredoxin From Desulfovibrio Gigas to Ultra-High 0.68A Resolution Biochem.Biophys.Res.Commun. V. 349 79 2006.
ISSN: ISSN 0006-291X
PubMed: 16930541
DOI: 10.1016/J.BBRC.2006.07.205