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Iron in PDB 2dxr: Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Sorbitol at 2.85 A Resolution

Protein crystallography data

The structure of Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Sorbitol at 2.85 A Resolution, PDB code: 2dxr was solved by R.Mir, R.Prem Kumar, M.Sinha, N.Singh, S.Sharma, A.Bhushan, P.Kaur, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.85
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.382, 50.391, 65.856, 90.00, 107.78, 90.00
R / Rfree (%) 19.8 / 22.7

Other elements in 2dxr:

The structure of Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Sorbitol at 2.85 A Resolution also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Sorbitol at 2.85 A Resolution (pdb code 2dxr). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Sorbitol at 2.85 A Resolution, PDB code: 2dxr:

Iron binding site 1 out of 1 in 2dxr

Go back to Iron Binding Sites List in 2dxr
Iron binding site 1 out of 1 in the Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Sorbitol at 2.85 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Sorbitol at 2.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1003

b:19.4
occ:1.00
OH A:TYR526 1.8 13.0 1.0
O2 A:CO31004 2.1 9.4 1.0
NE2 A:HIS595 2.1 12.0 1.0
OH A:TYR433 2.1 19.2 1.0
OD1 A:ASP395 2.2 13.8 1.0
O1 A:CO31004 2.5 5.2 1.0
C A:CO31004 2.7 6.0 1.0
CZ A:TYR526 3.0 10.7 1.0
CE1 A:HIS595 3.1 14.1 1.0
CD2 A:HIS595 3.1 12.1 1.0
CZ A:TYR433 3.2 17.9 1.0
CG A:ASP395 3.2 11.4 1.0
CB A:ASP395 3.8 12.2 1.0
O A:HOH1010 3.8 19.7 1.0
CE1 A:TYR526 3.8 10.7 1.0
CE2 A:TYR526 3.9 9.8 1.0
CE1 A:TYR433 3.9 17.9 1.0
O3 A:CO31004 4.0 3.6 1.0
CE2 A:TYR433 4.0 18.5 1.0
ND1 A:HIS595 4.2 16.2 1.0
CG A:HIS595 4.2 11.9 1.0
OD2 A:ASP395 4.3 13.6 1.0
NH2 A:ARG463 4.3 16.5 1.0
CA A:ASP395 4.4 12.6 1.0
CB A:THR464 4.6 10.5 1.0
O A:HOH1078 4.6 28.6 1.0
NE A:ARG463 4.7 17.2 1.0
OG1 A:THR464 4.8 11.6 1.0
N A:ALA465 4.9 11.1 1.0
N A:THR464 4.9 9.2 1.0

Reference:

R.Mir, R.Prem Kumar, M.Sinha, N.Singh, S.Sharma, A.Bhushan, P.Kaur, T.P.Singh. Crystal Structure of the Complex Formed Between C-Terminal Half of Bovine Lactoferrin and Sorbitol at 2.85 A Resolution To Be Published.
Page generated: Sat Aug 3 20:52:27 2024

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