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Iron in PDB 2e0s: Carbohydrate Recognition of C-Terminal Half of Lactoferrin: Crystal Structure of the Complex of C-Lobe with Rhamnose at 2.15 A Resolution

Protein crystallography data

The structure of Carbohydrate Recognition of C-Terminal Half of Lactoferrin: Crystal Structure of the Complex of C-Lobe with Rhamnose at 2.15 A Resolution, PDB code: 2e0s was solved by R.Mir, R.Prem Kumar, N.Singh, M.Sinha, S.Sharma, A.Bhushan, P.Kaur, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.15
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.511, 50.352, 65.896, 90.00, 107.88, 90.00
R / Rfree (%) 18 / 20.3

Other elements in 2e0s:

The structure of Carbohydrate Recognition of C-Terminal Half of Lactoferrin: Crystal Structure of the Complex of C-Lobe with Rhamnose at 2.15 A Resolution also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Carbohydrate Recognition of C-Terminal Half of Lactoferrin: Crystal Structure of the Complex of C-Lobe with Rhamnose at 2.15 A Resolution (pdb code 2e0s). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Carbohydrate Recognition of C-Terminal Half of Lactoferrin: Crystal Structure of the Complex of C-Lobe with Rhamnose at 2.15 A Resolution, PDB code: 2e0s:

Iron binding site 1 out of 1 in 2e0s

Go back to Iron Binding Sites List in 2e0s
Iron binding site 1 out of 1 in the Carbohydrate Recognition of C-Terminal Half of Lactoferrin: Crystal Structure of the Complex of C-Lobe with Rhamnose at 2.15 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Carbohydrate Recognition of C-Terminal Half of Lactoferrin: Crystal Structure of the Complex of C-Lobe with Rhamnose at 2.15 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1002

b:11.6
occ:1.00
OH A:TYR526 1.9 8.9 1.0
OH A:TYR433 2.0 9.6 1.0
O2 A:CO31003 2.0 10.2 1.0
OD1 A:ASP395 2.1 10.4 1.0
O1 A:CO31003 2.2 7.5 1.0
NE2 A:HIS595 2.2 10.4 1.0
C A:CO31003 2.4 8.9 1.0
CZ A:TYR433 3.0 10.3 1.0
CZ A:TYR526 3.1 5.3 1.0
CD2 A:HIS595 3.2 4.8 1.0
CE1 A:HIS595 3.2 7.3 1.0
CG A:ASP395 3.2 5.8 1.0
CE1 A:TYR433 3.6 11.7 1.0
O3 A:CO31003 3.7 6.0 1.0
CE1 A:TYR526 3.9 10.4 1.0
O A:HOH1016 3.9 14.8 1.0
CB A:ASP395 3.9 8.3 1.0
CE2 A:TYR526 4.0 7.2 1.0
CE2 A:TYR433 4.0 12.2 1.0
O A:HOH1008 4.0 11.1 1.0
OD2 A:ASP395 4.2 12.6 1.0
NH2 A:ARG463 4.2 11.7 1.0
ND1 A:HIS595 4.3 12.6 1.0
CG A:HIS595 4.4 8.8 1.0
CB A:THR464 4.5 9.4 1.0
CA A:ASP395 4.5 11.6 1.0
NE A:ARG463 4.7 14.0 1.0
N A:ALA465 4.8 8.1 1.0
N A:THR464 4.8 9.1 1.0
CD1 A:TYR433 4.9 14.0 1.0
CZ A:ARG463 5.0 16.3 1.0
OG1 A:THR464 5.0 11.5 1.0

Reference:

R.Mir, R.Prem Kumar, N.Singh, M.Sinha, S.Sharma, A.Bhushan, P.Kaur, T.P.Singh. Carbohydrate Recognition of C-Terminal Half of Lactoferrin: Crystal Structure of the Complex of C-Lobe with Rhamnose at 2.15 A Resolution To Be Published.
Page generated: Sat Aug 3 20:53:24 2024

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