Atomistry » Iron » PDB 2e1s-2eus » 2ei0
Atomistry »
  Iron »
    PDB 2e1s-2eus »
      2ei0 »

Iron in PDB 2ei0: Anaerobic Crystal Structure Analysis of 1,2-Dihydroxynaphthalene Dioxygenase From Pseudomonas Sp. Strain C18 Complexed with 3,4- Dihydroxybiphenyl

Protein crystallography data

The structure of Anaerobic Crystal Structure Analysis of 1,2-Dihydroxynaphthalene Dioxygenase From Pseudomonas Sp. Strain C18 Complexed with 3,4- Dihydroxybiphenyl, PDB code: 2ei0 was solved by D.B.Neau, M.S.Kelker, C.L.Colbert, J.T.Bolin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.15 / 1.60
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 117.870, 117.870, 121.594, 90.00, 90.00, 90.00
R / Rfree (%) 16 / 17.6

Other elements in 2ei0:

The structure of Anaerobic Crystal Structure Analysis of 1,2-Dihydroxynaphthalene Dioxygenase From Pseudomonas Sp. Strain C18 Complexed with 3,4- Dihydroxybiphenyl also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Anaerobic Crystal Structure Analysis of 1,2-Dihydroxynaphthalene Dioxygenase From Pseudomonas Sp. Strain C18 Complexed with 3,4- Dihydroxybiphenyl (pdb code 2ei0). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Anaerobic Crystal Structure Analysis of 1,2-Dihydroxynaphthalene Dioxygenase From Pseudomonas Sp. Strain C18 Complexed with 3,4- Dihydroxybiphenyl, PDB code: 2ei0:

Iron binding site 1 out of 1 in 2ei0

Go back to Iron Binding Sites List in 2ei0
Iron binding site 1 out of 1 in the Anaerobic Crystal Structure Analysis of 1,2-Dihydroxynaphthalene Dioxygenase From Pseudomonas Sp. Strain C18 Complexed with 3,4- Dihydroxybiphenyl


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Anaerobic Crystal Structure Analysis of 1,2-Dihydroxynaphthalene Dioxygenase From Pseudomonas Sp. Strain C18 Complexed with 3,4- Dihydroxybiphenyl within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe399

b:12.1
occ:1.00
OE1 A:GLU266 2.0 9.9 1.0
OA3 A:BP7400 2.2 16.0 1.0
NE2 A:HIS215 2.2 10.0 1.0
NE2 A:HIS152 2.2 9.5 1.0
OA4 A:BP7400 2.3 17.8 1.0
CA3 A:BP7400 3.0 14.6 1.0
CD A:GLU266 3.0 8.9 1.0
CA4 A:BP7400 3.1 15.9 1.0
CE1 A:HIS152 3.1 11.2 1.0
CE1 A:HIS215 3.1 9.8 1.0
CD2 A:HIS215 3.2 9.9 1.0
CD2 A:HIS152 3.3 8.2 1.0
OE2 A:GLU266 3.4 10.2 1.0
OH A:TYR256 3.5 11.8 1.0
CD1 A:ILE154 4.1 11.5 1.0
NE2 A:HIS200 4.1 13.3 1.0
ND1 A:HIS215 4.2 9.9 1.0
CZ A:TYR256 4.2 9.8 1.0
CB A:MET217 4.2 8.1 1.0
ND1 A:HIS152 4.2 10.1 1.0
O A:HOH902 4.3 24.4 1.0
CE2 A:TYR256 4.3 9.4 1.0
CA2 A:BP7400 4.3 14.4 1.0
CG A:HIS215 4.3 8.8 1.0
NE2 A:HIS247 4.3 17.4 1.0
CG A:HIS152 4.4 8.0 1.0
CG A:GLU266 4.4 8.2 1.0
CA5 A:BP7400 4.4 13.8 1.0
CG A:MET217 4.6 8.6 1.0
CB A:GLU266 4.7 7.3 1.0
CE1 A:HIS247 4.9 17.7 1.0
CD2 A:HIS200 5.0 13.4 1.0

Reference:

D.B.Neau, M.S.Kelker, H.Maaroufi, C.L.Colbert, L.D.Eltis, J.T.Bolin. Structural Explanation For Success and Failure in the Enzymatic Ring-Cleavage of 3,4 Dihydroxybiphenyl and Related Pcb Metabolites To Be Published.
Page generated: Thu Jul 17 00:53:23 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy